Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02854 ATGGGTGATAAGGAGCTTTTTGTTTTGGATAGAATTGGGTATGGCAAGATTGATAATACTGATGTTGTTGATGGTATGTATCCAATGTATTTTGGTGTTTCTTGTGCATTTTTTGCACTTCAAGTCCTTAGAAAAAAAGGTGTTGAAGTTGAAAATAATTTGTCTGAAATTGTTGAAACTATGCTTCAAGGAAGTGCACAGCTTTTGGGGTTGATTGTGTGGAAAGTTCAGAAGGAAGTGTCGAATGAGGTAAGCCAAAAGCTGAAAAGTGCTGAGATGGAAATTGAGAATCTGAAAAAGATTAGACACGAAGATGCAAAGGCGAATGAGAAAGTGGTTGGGATCTTTGCTGCACAAGAGCAAAGCTGGTTTAGCGAAAGAAGGAAACTTCGCCAACAGATTGGTGCTTTATTGAATGAGTTAAGAGTGTTTGAGAAAAAAAAGGATGCAGCAATCTCTGAATTGGATCAGGAGTTGAAGGAAATGGAGGGTTTGGTGGAGTCAAAAGACAAGAAGATTGAAGAAGAGGAGAAGAAGAGAAAGGAGTTAGAAGAAAAGGTGAAAAAAGCTGAAAGGGAAGCAGAAGAATTGAGAGAATCTTATCGGCATGATGCTCAAGAACATTCTTCTGATCTCAGGAAACACAAAACTGCTTTCATTGAGCTGGTTTCAAATCAAAGGCACCTTGAGGCTGAACTTGGCCGGGCTGTTAAGCACGCGGAAGCTACAAAGCAGGAGCTTATTTCTGTCATGGAGAATAAGGAGGAATCTGATTTAATGGTCCAGAAATTAACTTTGGAGATTGCAAAATTCCACAAGGATTTGGAACAAAAAGATAAGATTTTGTCAGCAATGTTGAGGAAATCTAAACTTGATATTGCGGAAAAGCAAATGCTGTTGAAAGAGGTTAAATTATCTAAGGCTAGAAGGAAGCAAGCTGAGCAAGAAACTGAAAAATGGAGGGTAGTTTCAGAAGGAAAACATGACAGACACTCCCTTAAAAACATGTTGCTGAATTTGAGTTCTAGGAAGGATGTTTTTCCTAGTGCCAGAGGCATGCAGCAATATAGTTCTTCAACAGGTTCCTCACATGTTTCAAATGAACAAGAACAATTTTCACCCATTTCTGATCACTACTTGTCTCAAAGAAACAAAGACTCGATCATTCCTGCTAATGCTAAGCGTTTGGAAGATTGGATGAGAGCTGAGACGGAAAGATATGCAACCCTGATTGAACAAAGGCATCACATAGAGCTAGATGCTTTTGCGGAACAAATGAGGATCAAAGATGAGAAGTTAGAGGCATTTAGGTGGAAGTTATTGAGAACAGAACTAGAAACAAAGCAGCTTCAATCTCACTTGGAGGGATTAGTGAAGGACGTGACACAGCTGAGACACGACAAGATGAAATTGGAGAGCTTATTATTGGAGAGAGAGGATGAACTTAATTCCCTAAGAGACCAAGTTGCATCAAAATTGAGGCCTTTAAACTGCTTTAGAAACAACTCTAGTTTGTCTCCACAATCTTCAGAACTGACTCCAGATCCTGTCTGGTCTAGAGTCAAGATTGTGAAGAGAAAACCAGGTGAAAAACAGCTAGAAACGATGGAAACTTTGATCGAGGAAGTTTGTGAAAAGGAGGTAGTGCAGCCTTTGAACCATGGCGAGTTTGAAAATTCCAATTCACAAGTTCAATCGCCAGATAATAGGATTGAAGAAGACAAGCATGTTTGCGGGGAGGAAAATCCTACTTCTGTTCAGTATCAAAGTCCAGATCACATAGAAATCGATACTGCTGAAAAAACAGGATCTACTAGCAAGCCCTTTAACGATGCAAAACAATTCCAATGGAAGATGGATCTTCATGCTCTTGGAGTATCTTACAAGATAAAAAGGCTTAAACAGCAGCTAATTCTTATTGAAAGGTTGACAGGAAGGCAAAACAACGAAGAACACGCAGAAATTAGTGAAGAAAGCAACTTTGGTATGAAGGCTTATTTGTCCTTGATTACTTTGCTTAATAAACAAATCGGAAGATATCAATCCCTCCAAGAGAAGACTGACGATCTTTGCAAACGGATGCAAGAGAATGTTCTCTACGCGAATCGCGGAGAAATAAATAATGCAAGAGCAAAGGAGAAAACATCAACCCTGGAGCATTTCTTGGAAGAGACATTTCAATTACAAAGATACATAGTTGCAACAGGGCAAAAAATGTTTGAAATTCAATCCAAGATCGTTTCTGGATTTGTTGGAGTGGCAGAAGAGATGGAAAAAAGTTCTGGCATTGACATGAATCGATTTTCTGACAGTATAAGGAAGCTGTTCCATGAAGTTCAAAGAGGTTTAGAAGTTCGTACAGCTAGAATTATAGGGGACCTTGAGGGAACATTGGCTCGTGAAGGAATGATATGCTTTAGAAGGTAG 2427 0.3923 MGDKELFVLDRIGYGKIDNTDVVDGMYPMYFGVSCAFFALQVLRKKGVEVENNLSEIVETMLQGSAQLLGLIVWKVQKEVSNEVSQKLKSAEMEIENLKKIRHEDAKANEKVVGIFAAQEQSWFSERRKLRQQIGALLNELRVFEKKKDAAISELDQELKEMEGLVESKDKKIEEEEKKRKELEEKVKKAEREAEELRESYRHDAQEHSSDLRKHKTAFIELVSNQRHLEAELGRAVKHAEATKQELISVMENKEESDLMVQKLTLEIAKFHKDLEQKDKILSAMLRKSKLDIAEKQMLLKEVKLSKARRKQAEQETEKWRVVSEGKHDRHSLKNMLLNLSSRKDVFPSARGMQQYSSSTGSSHVSNEQEQFSPISDHYLSQRNKDSIIPANAKRLEDWMRAETERYATLIEQRHHIELDAFAEQMRIKDEKLEAFRWKLLRTELETKQLQSHLEGLVKDVTQLRHDKMKLESLLLEREDELNSLRDQVASKLRPLNCFRNNSSLSPQSSELTPDPVWSRVKIVKRKPGEKQLETMETLIEEVCEKEVVQPLNHGEFENSNSQVQSPDNRIEEDKHVCGEENPTSVQYQSPDHIEIDTAEKTGSTSKPFNDAKQFQWKMDLHALGVSYKIKRLKQQLILIERLTGRQNNEEHAEISEESNFGMKAYLSLITLLNKQIGRYQSLQEKTDDLCKRMQENVLYANRGEINNARAKEKTSTLEHFLEETFQLQRYIVATGQKMFEIQSKIVSGFVGVAEEMEKSSGIDMNRFSDSIRKLFHEVQRGLEVRTARIIGDLEGTLAREGMICFRR 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02854 808 Coils Coil 81 101 - -
Vifa2g02854 808 PANTHER RIBONUCLEASE P PROTEIN SUBUNIT P38-LIKE PROTEIN 24 808 - -
Vifa2g02854 808 Coils Coil 468 488 - -
Vifa2g02854 808 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Vifa2g02854 808 Coils Coil 127 207 - -
Vifa2g02854 808 Coils Coil 291 316 - -
Vifa2g02854 808 Coils Coil 237 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02854 Vifa-Chr2 809511989 809514900 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02854 - - gmx:100815082 1113.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02854 2 809511989 809514900 Vifa2g02854 2 809511989 809514900 ECH