Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02818 ATGGAAATCCAAATGCCAGTTGTGATTGTAGGTGCTGGGCCTGCTGGGTTAGCAACCTCTGCATGTCTCAACAAACTTTCAATCCAAAATATTGTACTAGAAAGAGATGATTGTCATTCCTCTCTTTGGAGGAAAAGAACCTATGATCGTTTGAAACTTCACTTGGGCAAAGGCTTTTGTAACCTACCTCACAAGCCTTTCTCATCTGATCTTCCATTGTTTATCCCTAGGGTTGATTTTCTTCGCTATTTGGATGATTATGTGACTACTTTTAAGATCTTCATCCGCTACAACCGTTTTGTCCATGAAGCTTCTTTCGATGTCAACACCGGAAAATGGAGGGTTTGTGTGATGGATAGCGTGAAGAATGTTGGTGAAGTTTATGTTGCTGATTATTTAGTGGTTGCATCGGGAGAGAGCTGTGATGCTTATATTCCGAAGATAACCCGGCTTGAGAAGTTTGAAGGTGAATATTTTCATTGCAACAAGTATCAGAATGGAAGGCCTTATTATGATAAGAATGTGTTGGTTGTTGGTAGCGGAAATTCGGGTATGGAGATTGGTTATGATCTCTCTACTTGGGGTGCGAATACCGCCATGGTGATAAGGAGTCCGGTGCATTTTTTGATAAAAGAAATGGTGTACATTGGAATGACTATGCTGAAATACTTTAGTGTTGAAAATGTGGACAAGCTTATGTTCTTTATGAGCAAATTGGTGTATGGAGATTTGTCCAAGTATGGCTTGGTTAGACCAAAGGAAGGACCCTTTGCCTTGAAACTGAAGGGTGGTCGTACTCCTACTGTTGATGTTGGTACCATCAAACAGATCAAAGCTGGAAAAATAAAGGTATATTCAGAAATTTCAAGCATAAAAAACGGCAAGACCATTGAATTTGTAGATGGAAAAACTGGTGAATTTGACGTCATAATCTTTGCTACTGGATACAGAACCAATGTGCACAAGTGGCTCAAGGATTACAAAGTGCTATTTAATGAAAATGGAATGCCAAAAGCTGCTTATCCAAATCATTGGAAAGGAGAGAATGGAGTGTACGGTGTTGGATTCTCAAGAAGGGGGTTACAAGGCATTAATTATGATGCTCAGAGAGTTGCAAAGGATATCAGTGTCACTATCAATGCAAGGAAGATACATGCAGCTGATGATGAGGCCAATATTTTGCTCAAGTCAAGCTATTAG 1200 0.3983 MEIQMPVVIVGAGPAGLATSACLNKLSIQNIVLERDDCHSSLWRKRTYDRLKLHLGKGFCNLPHKPFSSDLPLFIPRVDFLRYLDDYVTTFKIFIRYNRFVHEASFDVNTGKWRVCVMDSVKNVGEVYVADYLVVASGESCDAYIPKITRLEKFEGEYFHCNKYQNGRPYYDKNVLVVGSGNSGMEIGYDLSTWGANTAMVIRSPVHFLIKEMVYIGMTMLKYFSVENVDKLMFFMSKLVYGDLSKYGLVRPKEGPFALKLKGGRTPTVDVGTIKQIKAGKIKVYSEISSIKNGKTIEFVDGKTGEFDVIIFATGYRTNVHKWLKDYKVLFNENGMPKAAYPNHWKGENGVYGVGFSRRGLQGINYDAQRVAKDISVTINARKIHAADDEANILLKSSY 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02818 399 Gene3D - 4 385 IPR036188 -
Vifa2g02818 399 SUPERFAMILY FAD/NAD(P)-binding domain 171 361 IPR036188 -
Vifa2g02818 399 PRINTS Pyridine nucleotide disulphide reductase class-II signature 6 28 - -
Vifa2g02818 399 PRINTS Pyridine nucleotide disulphide reductase class-II signature 170 194 - -
Vifa2g02818 399 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 6 380 - -
Vifa2g02818 399 Pfam Flavin-binding monooxygenase-like 7 326 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vifa2g02818 399 SUPERFAMILY FAD/NAD(P)-binding domain 2 240 IPR036188 -
Vifa2g02818 399 PIRSF FMO 3 349 IPR000960 GO:0050660|GO:0050661
Vifa2g02818 399 PRINTS FAD-dependent pyridine nucleotide reductase signature 7 26 - -
Vifa2g02818 399 PRINTS FAD-dependent pyridine nucleotide reductase signature 174 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02818 Vifa-Chr2 786497092 786498734 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02818 K11816 - gmx:100818396 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02818 2 786497092 786498734 Vifa2g02818 2 786497092 786498734 ECH