Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02812 ATGGCCCTTGAGAGTTGTTTAAGAGTTTCCACACCAAGACCTCATTGTCTTCCTCCACTGTTTTCATCTTCAAGAGGAAAGCTTGTTTTCTCAACTCAAAAGGTAGGATTCAAGAAATCTGTGCTGAACTCAACAGTTTCACTTCCATCTGGTGTTGCTTATAGAAAATCTCGTTTTGTTTGCAATGCTCGTGAAGCTGTAAATGAAGTTCAAGTAGTAAATGACTCAAGCTGGGATGAACTTGTGATTGGAAGTGAAACGCCTGTGCTTGTAGATTTTTGGGCACCATGGTGTGGTCCATGCAGAATGATAGCGCCTATAATCGATGAATTAGCCAAAGAATATGCTGGAAAAATTAAGTGTTACAAGCTCAACACAGATGAATCTCCAAACACTGCAACAAAGTATGGCATCAGAAGCATACCAACTGTTCTGTTTTTCAAGAATGGAGAGAAAAAAGACAGTGTAATCGGTGCAGTTCCTAAGGCTACTCTGTCTGAAAAAGTTGCGAAGTATATTGATGCATGA 528 0.3996 MALESCLRVSTPRPHCLPPLFSSSRGKLVFSTQKVGFKKSVLNSTVSLPSGVAYRKSRFVCNAREAVNEVQVVNDSSWDELVIGSETPVLVDFWAPWCGPCRMIAPIIDELAKEYAGKIKCYKLNTDESPNTATKYGIRSIPTVLFFKNGEKKDSVIGAVPKATLSEKVAKYIDA 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02812 175 PRINTS Thioredoxin family signature 89 97 - -
Vifa2g02812 175 PRINTS Thioredoxin family signature 97 106 - -
Vifa2g02812 175 PRINTS Thioredoxin family signature 137 148 - -
Vifa2g02812 175 FunFam Thioredoxin 64 173 - -
Vifa2g02812 175 ProSiteProfiles Thioredoxin domain profile. 33 175 IPR013766 -
Vifa2g02812 175 SUPERFAMILY Thioredoxin-like 57 174 IPR036249 -
Vifa2g02812 175 PANTHER GEO12009P1 68 173 - -
Vifa2g02812 175 CDD TRX_family 76 170 - -
Vifa2g02812 175 ProSitePatterns Thioredoxin family active site. 90 108 IPR017937 -
Vifa2g02812 175 Gene3D Glutaredoxin 70 174 - -
Vifa2g02812 175 Pfam Thioredoxin 70 170 IPR013766 -
Vifa2g02812 175 NCBIfam thioredoxin 74 171 IPR005746 GO:0015035
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02812 Vifa-Chr2 782630291 782631267 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02812 K03671 - gmx:100500292 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02812 2 782630291 782631267 Vifa2g02812 2 782630291 782631267 ECH