Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02800 ATGGATGTTGCACACTTTTTGTTTGGCATATTTGGGAATGCTTCCGCTCTGTTTCTCTTCTTGGCACCGGTGATTACATTCAAGAGGATTATAGTAAACAAATCAACAGAGCAGTTTTCAGGCATTCCTTATGTTATGACACTGCTCAATTGTCTTCTTTCAGCTTGGTATGGTCTTCCTTTTGTGTCTCCACACAACATACTAGTATCAACAATAAATGGCACTGGAGCAGTAATTGAAATCATATATGTTTTGATATTCATCCTATTTGCACCTAAGAAAGAAAAAATCAAAATCTTTAGCTTATTCACGGTGGTACTCTCTGTGTTCTCCGTGGTTGTTTTCGTGTCGCTCTTTGCCTTACATGGCACATATAGGAAGATGTTCTGTGGCTTCGCAGCGGCCATATTTTCTGTGATCATGTATGGTTCTCCTCTCTCAATTATGAGATTAGTAATCAAAAGCAAAAGTGTGGAGTTTATGCCATTCTTCTTGTCAGTGTTTGTGTTTCTTTGTGGCACTTCTTGGTTTATCTTTGGTCTATTAGGTCATGACCCATTTATTGCTGTACCTAATGGTCTTGGTTCTGTTTTGGGGGCAATACAACTTATATTGTATTTTATATACCGTGACAATAAAGGTATTCCAAAAAAACATGGTTCAACAGAGGAGAATTCAATGGAAATGGGCAATGGAAAAACACATCAAATGAAACACTCCAATTCAAACGAAATTCAAGGGTGA 744 0.3763 MDVAHFLFGIFGNASALFLFLAPVITFKRIIVNKSTEQFSGIPYVMTLLNCLLSAWYGLPFVSPHNILVSTINGTGAVIEIIYVLIFILFAPKKEKIKIFSLFTVVLSVFSVVVFVSLFALHGTYRKMFCGFAAAIFSVIMYGSPLSIMRLVIKSKSVEFMPFFLSVFVFLCGTSWFIFGLLGHDPFIAVPNGLGSVLGAIQLILYFIYRDNKGIPKKHGSTEENSMEMGNGKTHQMKHSNSNEIQG 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02800 247 FunFam Bidirectional sugar transporter SWEET 7 97 - -
Vifa2g02800 247 PANTHER RAG1-ACTIVATING PROTEIN 1 16 224 IPR047664 -
Vifa2g02800 247 MobiDBLite consensus disorder prediction 225 247 - -
Vifa2g02800 247 Gene3D - 127 221 - -
Vifa2g02800 247 MobiDBLite consensus disorder prediction 218 247 - -
Vifa2g02800 247 Pfam Sugar efflux transporter for intercellular exchange 130 213 IPR004316 GO:0016020
Vifa2g02800 247 Pfam Sugar efflux transporter for intercellular exchange 7 94 IPR004316 GO:0016020
Vifa2g02800 247 FunFam Bidirectional sugar transporter SWEET 126 219 - -
Vifa2g02800 247 Gene3D - 7 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02800 Vifa-Chr2 779157735 779159139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02800 1 190 Miscellaneous Gene Families AT1G21460 77.368 7.21e-107 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02800 K15382 - gmx:100800304 402.519
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02800 2 779157735 779159139 Vifa2g02800 2 779157735 779159139 ECH