Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02789 ATGAAGGGTAAATGTAATGTTTGGATCTTAGTTTCTTTCAGTGTGTTACTCACAACTGGGTCTTTGATTTCCTTCATGGTAGTCCTTTCATGGATTTACTCATATGCATTTTCTAGTCCTAGCTCAGTGATTAAGTGTTATGAGAGTATTGCTAACACTAGTAGTTCTCATTTACATGTTCAGAGCTATGTTGAGGCTTTGAATTTTAATGTTTCAAGGGATGCATGTGATGTGTTTGATGGAAGTTGGGTTAGGGATGATAGTTATAGTTACCCTTTATATGATGCTGATGAATGTCCATTTGTGGAAAGAGGTTTTAATTGTTTTGCTAATGGACGTAAAGATAGAGATTATACGAAATGGAGATGGAAACCGAATGACTGTGATATTCCAAGGTTTGATGCAAGGGGAATACTCGAACAGCTTCGCGGGAAACGGGTTGTTTTTGTTGGTGATTCGTTGAGTAGGACTCAATGGGAGTCTTTGATATGTTTGTTAATGACGGGAGTTGATAATAAGACGAGTGTTTATGAAGTCAAAGGCAATAAGATTACGAGACAGATTAGGTTTCTAGGTGTGAGATTTAGTTCTTTTGATGTTAGGATTGATTTTTATCGGTCTGTTTTTTTGGTGAAGCCTGGCCAGGGTCGTAGATTTGCGCGGAAAAGGGTGAAGACAACACTGAAATTGGACAAGATAGATGATATTAGTCATGAATGGGTTGATTCGGATGTTCTTATATTCAATTCAGGTCACTGGTGGACAAGGACCAAGCTTTTTGATATGGGCTGGTATTTTCAGGTTGGTAGCTCACTGAAGCTTGGAATGCCAATTAATTCAGCTTTCAAAACAGCTTTACATACATGGGCATCTTGGGTGGAGAATAATATTAACACAAACAGAACAAGAGTATTCTTCCGTACTTTCGAATCAACACATTGGAGTGGACATAACCACAATGCTTGCGAAGTGACTAAAAAGCCTTGGAACAAAACAAATGGCAAGGATCGAAACCCAATTTCAGATATGATCAAAAGTGTAGTAAAAAACATGAATGTTCCTGCTACGGTTCTTCACGTGACACCGATGGATGCATATAGGAGTGATGGCCATGTGGGGACTTGGAGCGACAATCCGTCTTTACCTGATTGTAGTCATTGGTGTTTACCTGGAGTTCCTGATATGTGGAACGAAATTCTATTCTCATATTTGCTACAAAAAGATGGAGCAGGTTCACATTAA 1242 0.3881 MKGKCNVWILVSFSVLLTTGSLISFMVVLSWIYSYAFSSPSSVIKCYESIANTSSSHLHVQSYVEALNFNVSRDACDVFDGSWVRDDSYSYPLYDADECPFVERGFNCFANGRKDRDYTKWRWKPNDCDIPRFDARGILEQLRGKRVVFVGDSLSRTQWESLICLLMTGVDNKTSVYEVKGNKITRQIRFLGVRFSSFDVRIDFYRSVFLVKPGQGRRFARKRVKTTLKLDKIDDISHEWVDSDVLIFNSGHWWTRTKLFDMGWYFQVGSSLKLGMPINSAFKTALHTWASWVENNINTNRTRVFFRTFESTHWSGHNHNACEVTKKPWNKTNGKDRNPISDMIKSVVKNMNVPATVLHVTPMDAYRSDGHVGTWSDNPSLPDCSHWCLPGVPDMWNEILFSYLLQKDGAGSH 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02789 413 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 34 400 IPR029962 GO:0016413
Vifa2g02789 413 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 130 402 IPR026057 GO:0016740
Vifa2g02789 413 Pfam PMR5 N terminal Domain 75 129 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02789 Vifa-Chr2 776191624 776193468 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02789 - - var:108329943 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02789 2 776191624 776193468 Vifa2g02789 2 776191624 776193468 ECH