Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02781 ATGCCACCAACAACAACAGAGTCACAGAAGAACCCTGTGACATATATGCACACAGTTTCAGAAGCTGGTCGTCTTCTCCCTTCATCAAGCCGCTGGAACTCCATAGCACTTGATTTTAAACTTACTCCTAAATCATCTATTTCCTATGAATCCATCCCTTCCAAATATCCAAAATCTGTTGACTGCAATCTTGTCATCACTGATAAGAAACACTTCCATATTTTTATTATTGTTGCAGTAGCTATACTTTTTGCTATCATAGGACTGGCTTTGCTGTTACACTTTTTACCTCAAAAACATAACCATCAAGACTCTTCAATCAATCTCAAGTTCGCTATAAACCAAGCTCTAACATTTTATGATGCCCAAAAATCTGGGAATTATCCAAGGAACAGTTCAGTGAAATATAGGGGAGACTCAGGATTACAAGATGGAAATTCAGCAAAGACTAATCTTATTGGTGGATATTATGATTCAGGCAACAACATTAAGTTTACTTTCACCACAGCTTATACTATGAGTTTGTTGAGTTGGACTGCAATGGAATATCAAACGAAATTCGCTGATATCGATGAACTTGATCATGTTAGGGATATCATCAAATGGGGTACTGACTATTTGCTTAAGGTGTTCATTACTTCAACTGGATCAAACCTTACACTATATTCACAGGTTGGAAGTACCATTAGTACTAATAATGAACCAAATGATATAAATTGCTGGCAAAGACCTGAAGACATGAGTTATGGTAGACCAGTTTCAGTTTGTGATGGCTCAGCTACAGATTTAGCTGGTGAAATTGTGGCAGCATTATCTGCGGCGTCGATGGTGTTCAAAGAAGACAAAGATTACTCAGGGAAGCTAGTTCAAGCAGCAGAAAGCCTATTTGAGGTAGTTACAAAGGAAGATCCTAAGAAGCAAGGAACCTACACCAATGTTGATGCATGTGGAAAACAAGCAAGAATGCTTTATAACTCATCTAGTTACAAAGACGAGTTAGCTTGGGGAGCAACTTGGTTGTTTCTTGCTACTAAGAACACTGATTATCTTGCAAATGCAACTGAGTATTTTTTATCAGCAAAGAATGATGAAACAATGTTAGACAAAGATGTGTTTTATTGGAATAACAAACTCAATGCTGTTGCGGTTTTGCTTGCTGGTATTCGATATTTCCGTGATCCTGGCTTTCCTTATGAAGATGTTTTGAAACTTTCATCAAATTCTACTCACTCATTCTTGTGTTCTTATCTTTTCAAAAAATATATGAGCAGGACACCTGGTGGATTGGTTCTTCCAAAACCTGATAATGGGCCATTACTCCAATATGCTGCAACAGCATCTTTTCTCAGTAAATTATACAGTGATTACATTGAGCATCTTAAAGTATCCGGTGCAAGTTGCGAAACCGATAAATTCTCAGTTGGGACGCTTCGTGATTTCGCTAGCTCTCAGGTTAACTACATCTTAGGACAAAACCCAATGAAAATGAGTTATTTAGTGGGATACGGCGACAAGTTTCCCGTCCAGGTTCACCACAGAAGTGCGTCGATCCCTTGGGATAAACGGCACTACAATTGCAACGATGGTAAGACATGGCTAAACTCTAAAAAACCGAACCCACAAGTTCTTTTGGGAGCCATGGTGGGAGGACCGGACACAAACGATAACTTCATCGATCAAAGGAGCAACCAAAGGTTTACTGAGCCAACCATAGCAAGCAATGCTGGCTTAGTTGCAGCATTGATTGCACTTCAAGATCCTTCAAATAATTCACATGACTTGAAAAACTCATTGTGGGAATGGACTTGA 1809 0.3897 MPPTTTESQKNPVTYMHTVSEAGRLLPSSSRWNSIALDFKLTPKSSISYESIPSKYPKSVDCNLVITDKKHFHIFIIVAVAILFAIIGLALLLHFLPQKHNHQDSSINLKFAINQALTFYDAQKSGNYPRNSSVKYRGDSGLQDGNSAKTNLIGGYYDSGNNIKFTFTTAYTMSLLSWTAMEYQTKFADIDELDHVRDIIKWGTDYLLKVFITSTGSNLTLYSQVGSTISTNNEPNDINCWQRPEDMSYGRPVSVCDGSATDLAGEIVAALSAASMVFKEDKDYSGKLVQAAESLFEVVTKEDPKKQGTYTNVDACGKQARMLYNSSSYKDELAWGATWLFLATKNTDYLANATEYFLSAKNDETMLDKDVFYWNNKLNAVAVLLAGIRYFRDPGFPYEDVLKLSSNSTHSFLCSYLFKKYMSRTPGGLVLPKPDNGPLLQYAATASFLSKLYSDYIEHLKVSGASCETDKFSVGTLRDFASSQVNYILGQNPMKMSYLVGYGDKFPVQVHHRSASIPWDKRHYNCNDGKTWLNSKKPNPQVLLGAMVGGPDTNDNFIDQRSNQRFTEPTIASNAGLVAALIALQDPSNNSHDLKNSLWEWT 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02781 602 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 487 513 IPR018221 -
Vifa2g02781 602 PANTHER ENDO-1,4-BETA-GLUCANASE 83 586 - -
Vifa2g02781 602 Pfam Glycosyl hydrolase family 9 112 581 IPR001701 GO:0004553|GO:0005975
Vifa2g02781 602 Gene3D - 106 587 IPR012341 GO:0005975
Vifa2g02781 602 SUPERFAMILY Six-hairpin glycosidases 110 594 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02781 Vifa-Chr2 771350801 771353140 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02781 55 584 Glycoside Hydrolase AT5G49720 45.620 9.85e-143 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02781 K01179 - gmx:100805472 962.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02781 2 771350801 771353140 Vifa2g02781 2 771350801 771353140 ECH