Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02780 ATGAAGAGGAGTAGAGATACTGAGAAGAGATCAGAGATAAACTCTGCCATTGAAGAGCTTTCAGTTCTTGTTATAGTCAAACCTGGAGAAAACCATGAAGCTCCACCTGCACGCATCCCAACCAAGCCTTTCCTATCTCTTTGCTACATGATTCTACAACTTCTTGATAAGGTAGGCCCAACAATGGTTGTTATTAGACAAGACATTCACCAGAATATTAAGAGGTTGGAAGCTATGTATGAATCAAACCCTTTAATCAATTCAAATTTGGCTGAGATATTGAAATCAGAAACTACCAAAGGCATTGCAAAGAAGAGAATCAGTGGCAGTAAATCCTTTGTTTGGCTTACTAGATCCTTGGATTTCACTTCAGCATTGTTCCAAGCATTACTAGTAAAAGAGCCTAAAAAGAATATGGAACAAGCAGTTCAAGAGTCTTATGATGCAACTTTGAAACCATGGCATGGATGGATTGCATCCACGGCTTTCAGAGTTGGTATAAAGCTAGTACCTGATACTAAAACTTTCATGGATCTCATCAGTGAAAAAGACGAAGAAGACCGTGACACTATAACGGAGAAAATGCAGATTTTGGTTTCATTGCTAGTGCCATTTCTGGAGGATATCCATTCTATTCTAAAAGTGTATAAATTGGACAGGCTTAAGTCAAACTGA 675 0.3837 MKRSRDTEKRSEINSAIEELSVLVIVKPGENHEAPPARIPTKPFLSLCYMILQLLDKVGPTMVVIRQDIHQNIKRLEAMYESNPLINSNLAEILKSETTKGIAKKRISGSKSFVWLTRSLDFTSALFQALLVKEPKKNMEQAVQESYDATLKPWHGWIASTAFRVGIKLVPDTKTFMDLISEKDEEDRDTITEKMQILVSLLVPFLEDIHSILKVYKLDRLKSN 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02780 224 SUPERFAMILY Glycolipid transfer protein, GLTP 35 221 IPR036497 -
Vifa2g02780 224 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 7 212 IPR014830 GO:0005737|GO:0120009|GO:0120013
Vifa2g02780 224 Pfam Glycolipid transfer protein (GLTP) 39 181 IPR014830 GO:0005737|GO:0120009|GO:0120013
Vifa2g02780 224 FunFam Glycolipid transfer protein 2 2 219 - -
Vifa2g02780 224 Gene3D Glycolipid transfer protein 1 220 IPR036497 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02780 Vifa-Chr2 771349412 771350622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02780 12 206 Acyl Lipid Metabolism Gene Families AT2G34690 18.974 3.51e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02780 - - gmx:100527808 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02780 2 771349412 771350622 Vifa2g02780 2 771349412 771350622 ECH