Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02770 ATGCAGAACAAGGGATCGAGACACCGATTTTCCACCATGGCGAATCGATCCCGAATTCCCTCACTATTCATCTCAATGTTCGCCACCTTCGCTTCCATCTACGTCGCCGGAAGGTTGTGGCAGGACGCTCAGAATCGTGTTTATCTCATCAAAGAGCTCGATAGGATCACTGGTCAGGGACAATCTGCTATATCAGTGGATGATACATTGAAGATCATAGCCTGCAGGGAACAACATAAGAAGCTTGACGCACTTAAGGTGGAACTTGATGCTGCTAAACAAGAGGGTTTTATTTCAAAGGGCTTGACTGAGAGCAACGGGACTTACTCTAAGAGAAGGCCTTTGGTAGTCATAGGTATACTGACAAAGTTTGGCCGCCTGAAGAATAGAGATGCCATTCGCAAGGCTTGGATGGGAAATGGTGCATCTTTGAAGAAAATTGAAGATGGAAAGGGCATCATTCTGCGATTTGTAATTGGTAGAAGTGCAAATCGTGGGGACAATCAAGATAAAGACATTGATCGTGAGAATGGGTTGACGAATGACTTCCTAATTCTAGATGATCACGTGGAAGGATCCCAGGGGCACGCAGAGAAGGCTAAATTGTTTTTTGCTCACGCTGCAGACAGATGGGATGCAGAGTTTTATGCCAAAGTCAATGATGATGTTTATGTAAATATTGATGCGTTGGGAGCTACACTTGCAACTCATTTGGACAAACCTCGGATTTACATGGGATGCATGAAATCAGGCGAAGTTTTCTCTGAACAGAACCATAAATGGTATGAACCAGAATGGTGGAAATTTGGTGACAAAAAATCATACTTTCGTCATGCATCAGGAGAGATGTATGTTATATCACAAGCTTTGGCTAAATTCATATCAATAAACAGATCGATTCTTCGTACCTATGCCCATGACGACGTGAGTGCTGGATCCTGGTTTATTGGGCTTGATGTGAAGCATATTGACGAGACAAAGTTTTGTTGCTCGTCTTGGTCGACAGGAGCAATTTGTGCGGGTGTTTGA 1029 0.4363 MQNKGSRHRFSTMANRSRIPSLFISMFATFASIYVAGRLWQDAQNRVYLIKELDRITGQGQSAISVDDTLKIIACREQHKKLDALKVELDAAKQEGFISKGLTESNGTYSKRRPLVVIGILTKFGRLKNRDAIRKAWMGNGASLKKIEDGKGIILRFVIGRSANRGDNQDKDIDRENGLTNDFLILDDHVEGSQGHAEKAKLFFAHAADRWDAEFYAKVNDDVYVNIDALGATLATHLDKPRIYMGCMKSGEVFSEQNHKWYEPEWWKFGDKKSYFRHASGEMYVISQALAKFISINRSILRTYAHDDVSAGSWFIGLDVKHIDETKFCCSSWSTGAICAGV 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02770 342 Coils Coil 75 95 - -
Vifa2g02770 342 Gene3D - 108 335 - -
Vifa2g02770 342 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 93 322 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vifa2g02770 342 Pfam Galactosyltransferase 129 324 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vifa2g02770 342 FunFam Hexosyltransferase 105 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02770 Vifa-Chr2 768641685 768647476 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02770 21 342 Glycosyltransferase AT5G53340 71.739 1.20e-179 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02770 K20854 - gmx:100779561 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02770 2 768641685 768647476 Vifa2g02770 2 768641685 768647476 ECH