Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02758 ATGGTGGATTCAGACCGAATCCAAAACCCATGGATGGCGTCGGAACAAACCCCAATGGAACTCAACAACGCTTCTCCTCCGTTGAAATCATCAAATAGTGATAAATTAGGGATTGCTGAACGCGCTTTCTCTGCCTCCGGCGCCGCTGTTCTCTCCGCCGTCATTGTTAACCCCCTTGATGTTGCCAAGACAAGGTTGCAAGCACAAGCTGCTGGAGTTGCTTATTCTCATCCACTCAGTAATTTGATCAGCAGAATGTCTTGTTTTGGCCCTAATATGATGTTTGCCGATTTAAGATGTTCTCCATCGTGTACCCGGGCGGGATTCCATGGCACTGTATCACTTTGTCCTCCTGATTGTTTTCGATACAAAGGAACACTAGATGTCATGTATAAAATTACTCAACAGGAAGGATTTACTAGGCTATGGAGAGGCACTAACGCAGGACTCGCACTTGCAGTACCAACTGTTGGAATTTATCTTCCTTGTTATGACATATTTCGTAACTGGTTTGAGGAATACACAGCCAAAAATGCTCCTGTTGCAACTACATATGTACCTTTAGTGGCTGGTTCGTTGGCACGCTCACTGGCTTGTGCAACCTGTTATCCTATTGAACTTGCCAAAACTCGCATGCAGGCATTTAAAGAGACTCAAATCGGTAAAAAGCCACCTGGAGTATACCAAACTTTGCTAGGTGTTGTCTCTAATGTCAAGGGCACAAGTAATTCACCAAACAGCTTGCAAGGTTATCGTGCCCTGTGGACTGGCATGGGCGCACAGCTTGCTCGTGATGTACCATTCTCTGCAATTTGTTGGTCGACACTTGAGCCAACTAGAAGGAAACTTATTAGTTTGGTTGGAGGCGATGATGCCGGTATATTGAGTGTTCTTGGCGCAAATTTTTCAGCTGGTGTTGTTGCAGGAACTCTAGCGGCTGGAGCTACATGTCCACTAGATGTTGCAAAAACTCGAAGACAGATAGAGATGGATCATGTCAGAGCTTTGAAGATGACTACTAGACAGACACTGATCGGGATTTGGAGAGACGGAGGCTTGAAAGGACTTTTCACTGGTTTTGGTCCGCGAGTTGGTCGAGCTGGCCCCTCTGTTGGAATTGTGGTTTCGTTTTATGAAGTTGTGAAGTATGTCTTAAATCACCGGAACGTAACAACGTGA 1179 0.4555 MVDSDRIQNPWMASEQTPMELNNASPPLKSSNSDKLGIAERAFSASGAAVLSAVIVNPLDVAKTRLQAQAAGVAYSHPLSNLISRMSCFGPNMMFADLRCSPSCTRAGFHGTVSLCPPDCFRYKGTLDVMYKITQQEGFTRLWRGTNAGLALAVPTVGIYLPCYDIFRNWFEEYTAKNAPVATTYVPLVAGSLARSLACATCYPIELAKTRMQAFKETQIGKKPPGVYQTLLGVVSNVKGTSNSPNSLQGYRALWTGMGAQLARDVPFSAICWSTLEPTRRKLISLVGGDDAGILSVLGANFSAGVVAGTLAAGATCPLDVAKTRRQIEMDHVRALKMTTRQTLIGIWRDGGLKGLFTGFGPRVGRAGPSVGIVVSFYEVVKYVLNHRNVTT 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02758 392 Gene3D Mitochondrial carrier domain 98 390 IPR023395 -
Vifa2g02758 392 PANTHER FI19922P1-RELATED 29 389 IPR045315 GO:1990542
Vifa2g02758 392 ProSiteProfiles Solute carrier (Solcar) repeat profile. 296 384 IPR018108 -
Vifa2g02758 392 ProSiteProfiles Solute carrier (Solcar) repeat profile. 182 282 IPR018108 -
Vifa2g02758 392 SUPERFAMILY Mitochondrial carrier 35 380 IPR023395 -
Vifa2g02758 392 MobiDBLite consensus disorder prediction 9 30 - -
Vifa2g02758 392 ProSiteProfiles Solute carrier (Solcar) repeat profile. 36 170 IPR018108 -
Vifa2g02758 392 Gene3D Mitochondrial carrier domain 12 88 IPR023395 -
Vifa2g02758 392 MobiDBLite consensus disorder prediction 1 30 - -
Vifa2g02758 392 Pfam Mitochondrial carrier protein 185 283 IPR018108 -
Vifa2g02758 392 Pfam Mitochondrial carrier protein 36 173 IPR018108 -
Vifa2g02758 392 Pfam Mitochondrial carrier protein 300 388 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02758 Vifa-Chr2 763030658 763034710 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02758 132 382 Organic Solute Cotransporters AT3G55640 26.848 5.85e-17 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02758 K15119 - gmx:100810960 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02758 2 763030658 763034710 Vifa2g02758 2 763030658 763034710 ECH