Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02750 ATGGTGAACAATAATTTTGTTCCCAATGGTCTTTTATTATCTAGTGAAAAAACATTTGTTGCTAGGGTGCTTGAAGGAGAAAGATGGTCACAAATTGAAGGTAGAACCACAGAGCTGCTTCAATGTGTTCAGCTGAATCATAAATCAGAAGCACTTAGAAATAATATTATAACTTATTTAAAGGGTCTCATCACTAACCATGTCCCTTGCCAGGTATTTGAATTTGGATCAGTGCCTTTGAAGACTTACTTACCTGATGGGGATATTGATCTCACAGTTTTTGGCATCAATACAATTTTGCCTGAAAATTTCATTCATGAGATTCTGCAAATCATACAGAATCAAAAGGAAAATGAGTTTGCTGAATTTAGGGTTAAAGAGGTTAAGCTTGTCCAAGCAGAGGTGAAGGTTATAAAGTGCTTGATTGAAAGTTTTGCGGTTGACATATCTTTCAACCAATTGAGTGGTTTATGTTCACTTTGTTTTTTTGAGGAGGTTAATCTTTTGATAGGACATCATCATATGTTCAAGCGTAGCGTTATACTGATAAAAGCTTGGTGTTACTACGAGAGCCGCCTCCTGGGTTCCAACAGTGGGCTCTTTTCAACCTATGGGTTGGAAATTTTAGTATTATACATATTTAATCTTTACAACAATGATTTTGCTGGACCACTTCAGGTGCTATTTCGATTTCTGGAGTTCTTCAGTAACTTTGACTGGGAAAACTATTGCATTAGCTTGAGTGGACCAGTGCCCAAAGACTCACTTCCTAATATGATAGCCGAGTCTCCAAGAAAAGATTGTGAAAGCCAAGAATTATTGCTCACTGAATTGTTTCTCAATGCTTGTAAGACTTGTTATGGCAATACGCCACGCAGTCAGGAAAATCACGAGAAACATTTTGTTACCAAACACATCGACATTATAGATCCTTTGTGTGCAGACAACAATCTGGGGCGTAGCATCAATAAAGGAAGCTTCTTTAGGATAAAGAATGCAATTGCTTTTGGTGCTAAGAGGATGTTGAGAATTCTAGAATGCACGGATGAGAATCTAATAGCTGAATTTGATTACTTTTTCAAAAGCACATGGAATAGAAATGGGAATGGTTATTGGATTCATGTAAGCGTTTATAATCTTTATATAAGAAATAAAAAAATTGGAAAGCCAATACGTCAAGAATCTGAGGATGAGCAGGCTCTAGCTTCTCGTGAGTCTCAATATAATAACCAAAATCCTGATAACCAATTATCAGATATGGGACTGCATAAGGAAGAGCCTGATTGTTTGAATAACACAGCAAGTAGAAGGAATCTTCAGTTGAGTGGATATTTGCATGCACTGACGGGTCAGTCTGCTGCTAAGGAAGAACCTGGTGTTGGGAATATGACTGAAAATAGCAGGATTGAATATCCGGGAACAGTAAAGGGTGCAAAGTCAGAAAACAATGAGGTAGTGAGGCAGAAAGAGGAAGAGCATCATTTGGAGAGTACTACGGAAAGTTGTACGAGTCTCAAGTCCAATGGATACCTGCAGGCGCTTTTGGGAGTGAAAAAAAGTGATGCATCTTTTTCATCACCACCACCAAACATATCTTTCTCTCTAGATGTAGTTCAATTTCCGGAGCTACAAGAGTTTCCCAGTGGCAAAAGGTCATTAAATTTGGGACAAGACAGAGTTGATCCACCTGCTGTAATAACCACAGATAGTATTGTGTTGAGCCGCCCAGAAGTCTGTAAAAACACACCAGCTTCAGACTCAACCTCAGAGACCAGACTCTCATCCTTGCTTCTGAAGCCAACTCATCCTCAAGATGTCCTTGGTCCATCAATCGAGAATGCGGACATCTTCAGGCATGACAACACCGCGGCTGAATCTGATGCCTTAAATGTTCATGCGCTTCAATCACCATATGCATCTGGTTCATCTGGGATACAACTTCCATTCTCAATCAGCAATAGCAGTCATGTTGAAGCTTCACATTATTTAGGGAACCAATTTTCAGATATTCTTAATGGTGATTTTGTAAAATATTGGACAAATCTTCAATATGGGCGATATTGTGAGATTGGACCATTAGAGGAGCCTTTGCTTTATCTTCCCACTTCTGAACAGCTAATGGATTTTCAAGAGCAGTATCATATGAATAGGAGGCCTTCAAGTTCTGCAAACGTTGTGGCTCCCGTAGTTCCTGACATGCCACCAACACTTGCTTTTTACTCGCATGAAGGCATAAATCAAAGCGTTTCTTTTTGGCTTCCCAGATTTAGTGGAGGCACTGGGTCTTTCATACCAAATCCACTTGCTTACAACCAGAAATATTACGACCGTCAGCCTTACAACAAACATCAGAATGCAAATTACAGATCTGAGAGACCTGGGAATTCGAATTTCAGCTCAAGGGGAAGGGCTTCTAGATCCAACAACGTGCCACACAATTTGAATTCTAATTTCAGGGAAAGGTTTTCCAGCCGTGGCCAGAATCATTATAGACAACGTGAGAAACTAGGTAAAAAGAAAGCATTGCATCAAGGCGAAGGGTCAAGTAGTGCCGTTAATGAACTTAAAAATTTTGAAAAGGGTTCGAAAGATATTTCGCCACATCAGTCCTGA 2613 0.3957 MVNNNFVPNGLLLSSEKTFVARVLEGERWSQIEGRTTELLQCVQLNHKSEALRNNIITYLKGLITNHVPCQVFEFGSVPLKTYLPDGDIDLTVFGINTILPENFIHEILQIIQNQKENEFAEFRVKEVKLVQAEVKVIKCLIESFAVDISFNQLSGLCSLCFFEEVNLLIGHHHMFKRSVILIKAWCYYESRLLGSNSGLFSTYGLEILVLYIFNLYNNDFAGPLQVLFRFLEFFSNFDWENYCISLSGPVPKDSLPNMIAESPRKDCESQELLLTELFLNACKTCYGNTPRSQENHEKHFVTKHIDIIDPLCADNNLGRSINKGSFFRIKNAIAFGAKRMLRILECTDENLIAEFDYFFKSTWNRNGNGYWIHVSVYNLYIRNKKIGKPIRQESEDEQALASRESQYNNQNPDNQLSDMGLHKEEPDCLNNTASRRNLQLSGYLHALTGQSAAKEEPGVGNMTENSRIEYPGTVKGAKSENNEVVRQKEEEHHLESTTESCTSLKSNGYLQALLGVKKSDASFSSPPPNISFSLDVVQFPELQEFPSGKRSLNLGQDRVDPPAVITTDSIVLSRPEVCKNTPASDSTSETRLSSLLLKPTHPQDVLGPSIENADIFRHDNTAAESDALNVHALQSPYASGSSGIQLPFSISNSSHVEASHYLGNQFSDILNGDFVKYWTNLQYGRYCEIGPLEEPLLYLPTSEQLMDFQEQYHMNRRPSSSANVVAPVVPDMPPTLAFYSHEGINQSVSFWLPRFSGGTGSFIPNPLAYNQKYYDRQPYNKHQNANYRSERPGNSNFSSRGRASRSNNVPHNLNSNFRERFSSRGQNHYRQREKLGKKKALHQGEGSSSAVNELKNFEKGSKDISPHQS 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02750 870 CDD NT_PAP_TUTase 52 159 - -
Vifa2g02750 870 MobiDBLite consensus disorder prediction 393 424 - -
Vifa2g02750 870 MobiDBLite consensus disorder prediction 784 823 - -
Vifa2g02750 870 SUPERFAMILY PAP/OAS1 substrate-binding domain 175 345 - -
Vifa2g02750 870 MobiDBLite consensus disorder prediction 784 870 - -
Vifa2g02750 870 SUPERFAMILY Nucleotidyltransferase 45 192 IPR043519 -
Vifa2g02750 870 Gene3D - 154 360 - -
Vifa2g02750 870 Gene3D Beta Polymerase, domain 2 46 153 IPR043519 -
Vifa2g02750 870 MobiDBLite consensus disorder prediction 402 418 - -
Vifa2g02750 870 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 17 855 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02750 Vifa-Chr2 758107021 758112764 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02750 - - psat:127082195 1548.1