Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02669 ATGATTACACGCCACTTATGGATAGCGTTTCCACTCTTGCTGCTGGCGTTTCCCTTGCTTTGGGCAGCTGAAGAGGAGGATTCCACCAGAAATAGCATCATCTTCACCACACTTGGCAGAGCTTTTTATGCTTTTGATATCTATTCCCTCCCAATTCAACTACACCACCAATCACCCAACAACGCTAACCAAGAGTTACAACTCACTGACGGCCACTCCGTCAATTTTAACGGCCACTTTCTTTCCACCAATCACACATGCATTAAACTCCCATCAGACCTAGACCAGCCTCCTCTTCACCTCGTTTACGTTACCGAGAGAAGCGGATTTCCCACCATTTACTACGATGCTGTCTATCCAACCAGCACAAGGAGATCAACACTTGAATCCGTCATCACAAAAAGAATTCAAATTCCTTTGTTGCATAATCCCGTCACAGAAACTCAGAATCAAGTTTCAATCAAAGATAAACCCAGTGTCACCAGCGATGGTGAATATTTAGTCTATATCTCAACACACGAGAATCCTGGCGTGCCACGTGTCAGTTGGACCGCCGTTTATTCCACTCACCTCAAATCAGGTCTCACCAGAAGACTCACTCCCTACGGCGTCGCTGATTTCAGTCCCGCCGTTTCTCCCTCCGGCAAATGGACTGCAGTTGCTTCTTATGGTGCCCAAGGTTGGTCTGGCGAAGTAGAGGATCTTACTACAGATATCTACGTTTTCCTCACTATAGACGGAACTCAGCGACGGAAGGTGGTTGAGCATGGTGGCTGGCCGTGTTGGGTTGACGATCGAACTATTTACTTTCACCGGAGAGGCGTTGACAACTGGTGGAGTATTTACAAAGCGATACTCACCACCGATTCTTTAAACTCGGTGATAATTGAACGAGTCACCCCACCGGGTCTGCACGTGTTCACACCAGCAACTTCACCGGGAAACCATAAGTTCATCGCCGTCGCAACAAGAAGACCTGACTCCAGTTTTCGTCATATTGAGTTGTTTGACCTGGTTAACAACGAGTTCAAGGAGGTAACTCGTTTCGTCTCGCCTCAAACTCACCACCTGAACCCGTTTATCTCACCCGACTCAACACGGGTCGGGTACCACAAGTGTAGGGGGAAGGAAAGTAATACAAGTCCTCAGTTTTTACTAGAGAATGTTCGGAGTCCCGTTCCGAATCTTACACTTTTTCGGTTCATCGGTTCGTTTCCGGTTTTCTCACCCCATGGAGACCGAATCGCTTACGTTGAGATGCCTGGGGTTTATGTAATGAACCGAGACGGTTCGAACCTGCGAAAGGTTTCTAACGCGATGGCTTTCTCAACAGCATGGGACCGGGTTCGAACCGGTATAATATACACGGCAGTTGGACAAACATTTGCTTCGGAGAGTACGGAGGTTGATATCATCTCCATCGATGTCGAGAGGAATATCGTCAAGAAATTGACCTTAGACGGAAAGAACAATGCCTTTCCGTCTCCTTCCTCAGACGGAAAATGGATCGTGTTTCGTTCGGGTCGTTCGGGTCATAAGAATCTCTACGTGATGGATGCTGTTGAGGGAGAGAAAGAAGGGCTTAGAAGGTTAACGGAGGGTCCATGGACGGATACAATGTGCAACTGGTCACCTGATGGAGAATGGATCGCTTTTGCGTCGGATCGCCACCATCCAGGGAGTGGAAGCTTCGAGGTTTATCTGATCCACCCAGATGGAACCGGGTTGAGGAAACTAGTTCAAAGTGGGTCGAGTGGGAGGACGAATCACCCCTATTTTAGCCCAGATGGAAAGAGTCTTGTGTTTACTTCAGACTATGCAGGTATATCAGCTGAGCCAATTTCAAACCCGCATCATTATCAGCCGTATGGTGAAATATTCACCATTCAATTGGATGGTTCGGGTTTGACACGATTGACACATAATTCGTATGAAGATGGGACCCCTGCTTGGTCACCCAGGTATATCAAACCAGTGAATGTTGATAGGCCCAAGGGTGGACCTTATTGTTCTTTTGATGATTGTCACTGGCTCAACAACATGCCAAAGTACAGAAGTTTAAAGGTGTTGGCTGAAGATTTTGATAATGTTATCTAG 2097 0.4716 MITRHLWIAFPLLLLAFPLLWAAEEEDSTRNSIIFTTLGRAFYAFDIYSLPIQLHHQSPNNANQELQLTDGHSVNFNGHFLSTNHTCIKLPSDLDQPPLHLVYVTERSGFPTIYYDAVYPTSTRRSTLESVITKRIQIPLLHNPVTETQNQVSIKDKPSVTSDGEYLVYISTHENPGVPRVSWTAVYSTHLKSGLTRRLTPYGVADFSPAVSPSGKWTAVASYGAQGWSGEVEDLTTDIYVFLTIDGTQRRKVVEHGGWPCWVDDRTIYFHRRGVDNWWSIYKAILTTDSLNSVIIERVTPPGLHVFTPATSPGNHKFIAVATRRPDSSFRHIELFDLVNNEFKEVTRFVSPQTHHLNPFISPDSTRVGYHKCRGKESNTSPQFLLENVRSPVPNLTLFRFIGSFPVFSPHGDRIAYVEMPGVYVMNRDGSNLRKVSNAMAFSTAWDRVRTGIIYTAVGQTFASESTEVDIISIDVERNIVKKLTLDGKNNAFPSPSSDGKWIVFRSGRSGHKNLYVMDAVEGEKEGLRRLTEGPWTDTMCNWSPDGEWIAFASDRHHPGSGSFEVYLIHPDGTGLRKLVQSGSSGRTNHPYFSPDGKSLVFTSDYAGISAEPISNPHHYQPYGEIFTIQLDGSGLTRLTHNSYEDGTPAWSPRYIKPVNVDRPKGGPYCSFDDCHWLNNMPKYRSLKVLAEDFDNVI 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02669 698 Gene3D - 582 656 IPR011042 -
Vifa2g02669 698 Gene3D - 140 387 IPR011042 -
Vifa2g02669 698 SUPERFAMILY DPP6 N-terminal domain-like 158 437 - -
Vifa2g02669 698 Pfam WD40-like Beta Propeller Repeat 586 605 IPR011659 -
Vifa2g02669 698 Pfam WD40-like Beta Propeller Repeat 529 567 IPR011659 -
Vifa2g02669 698 Pfam WD40-like Beta Propeller Repeat 483 517 IPR011659 -
Vifa2g02669 698 Gene3D - 422 581 IPR011042 -
Vifa2g02669 698 PANTHER DPP6 N-TERMINAL DOMAIN-LIKE PROTEIN 18 678 - -
Vifa2g02669 698 SUPERFAMILY Tricorn protease N-terminal domain 404 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02669 Vifa-Chr2 714312236 714314875 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02669 - - mtr:25489690 1163.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02669 2 714312236 714314875 Vifa2g02669 2 714312236 714314875 ECH