Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02659 ATGAATTCGGTGAAAATAACGATGAAGAGACAAAGATCCCCCAAATCGGTACCTCCACCACCCTCAACCCCTCCAACACCCCAAACCCAATCCCGCCACTCCACCAACCTCTCCAAATCCCGCCTCTGGATCCCTCTCAACCTAACCCGACAAGACCTCTCTCTACCCCTCACCTTCCCCACCGGCCAAACCTTCCGATGGAAAAACACTGCTCCTTTCCGATACACCGGCGTCGTCGGATCCAATCTCATATCCCTCAAACACCTCCAGAACGGCGACGTTTGCTACTCGCTTCACTCTCAATCAAACGACGATGCCAAAACGGCATTACTCGATTTCTTAAACGCAGACGTTTCTCTTGCTGACACGTGGGAGGTTTTCTCGGCTAATGATGAAAGATTCGCCGAATTAGCGCAACATTTGGTTGGTGCTAGGGTTTTGAGACAAGATCCCTTTGAATGCTTGATTCAGTTCATGTGTTCTTCCAATAATCATATTAGTAGAATCACGAAAATGGTTGATTATGTTTCGTCTCTTGGGACTTATTTAGGTCACGTTGAAGGCTTTGATTTTCATGCCTTCCCTACTCTTCAACAGCTTTCATTGGTTTCTGAACAACAACTCAGAAACGCTGGTTTTGGTTACAGGGCTAAGTATATAGTTGGAACTGTAAATGCTTTGCAATCAAAACCTCAAGGTGGAGAAGAATGGCTTCATTCTCTTCGGAAATTGGAACTACAAGATGTTATATCTCAACTTTCCAAGTTACCTGGAGTGGGTCCTAAAGTGGCTGCTTGCATAGCTCTTTACTCCCTTGATCAACACCATGCCATTCCTGTTGATGTTCATGTGTGGCGGATTGCCCAAAAGTATCTCTTACCTGAGCTTGCAGGTTCCAAGTTGACGCTGAAGCTTTGCAATCGTGTTGCAGAGGCATTTGTAACAAAATATGGTAAATATGCCGGTTGGGCTCAAGCTGTTTTATTTATTGCTGAGTTGCCTTCACAAAAGGCCATCCTACCTGAACATTTGAGGGCTACCAAACAGCCGAAGCCCGCTAAGATAGAAAGCAGTGAAGAATCTGGTTCTTCTACTATGCGTTATTGTTTACAGATCTTTCCACGACCTTCAATCATGGTCAACATGAGTTGA 1152 0.4514 MNSVKITMKRQRSPKSVPPPPSTPPTPQTQSRHSTNLSKSRLWIPLNLTRQDLSLPLTFPTGQTFRWKNTAPFRYTGVVGSNLISLKHLQNGDVCYSLHSQSNDDAKTALLDFLNADVSLADTWEVFSANDERFAELAQHLVGARVLRQDPFECLIQFMCSSNNHISRITKMVDYVSSLGTYLGHVEGFDFHAFPTLQQLSLVSEQQLRNAGFGYRAKYIVGTVNALQSKPQGGEEWLHSLRKLELQDVISQLSKLPGVGPKVAACIALYSLDQHHAIPVDVHVWRIAQKYLLPELAGSKLTLKLCNRVAEAFVTKYGKYAGWAQAVLFIAELPSQKAILPEHLRATKQPKPAKIESSEESGSSTMRYCLQIFPRPSIMVNMS 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02659 383 Pfam HhH-GPD superfamily base excision DNA repair protein 156 291 IPR003265 GO:0006284
Vifa2g02659 383 SUPERFAMILY TATA-box binding protein-like 36 149 - -
Vifa2g02659 383 PANTHER 8-OXOGUANINE DNA GLYCOSYLASE 30 351 - -
Vifa2g02659 383 SUPERFAMILY DNA-glycosylase 150 331 IPR011257 GO:0003824|GO:0006281
Vifa2g02659 383 SMART endo3end 160 332 IPR003265 GO:0006284
Vifa2g02659 383 FunFam N-glycosylase/DNA lyase 150 274 - -
Vifa2g02659 383 Pfam 8-oxoguanine DNA glycosylase, N-terminal domain 46 155 IPR012904 GO:0003684|GO:0006289|GO:0008534
Vifa2g02659 383 Gene3D - 124 333 IPR023170 -
Vifa2g02659 383 Gene3D - 29 114 - -
Vifa2g02659 383 MobiDBLite consensus disorder prediction 1 36 - -
Vifa2g02659 383 CDD ENDO3c 152 330 IPR003265 GO:0006284
Vifa2g02659 383 FunFam N-glycosylase/DNA lyase OGG1 271 333 - -
Vifa2g02659 383 Gene3D Hypothetical protein; domain 2 150 274 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02659 K03660 - gmx:100789749 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02659 2 711102984 711104841 Vifa2g02659 2 711102984 711104841 ECH