Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02649 ATGGGCTGCGAGTGCTCCAAGGTGGAGGAGTTCCCCGTGGTAACTCTTTGCCGAGAAAGAAAACAGTTTCTCAAAAACGCCTCCGACCAACGCTACGCTCTCGCCGTCGCGCACGTCGCTTATATGCAATCTCTTAAAGATATCGGCGAAGCTCTTCGGAAATTCTCCGATCGGGATCTCTTTCTTCCTGCAAGTTCTGCTTCTTCTTCCTCTACATTTTCTTCCCCTGTTCTCACATTGCCTTCACGTGAAGGTAAATCGAAAGATGGTAGTAGCCACCATCACATTTCGTCTTCTTCACCTTCTCACGATGGTTCTGGTTCTGGTTCTCATGTGCATCTTTCTTCTGGATCCGAGGTGAGTTCTCCTTCTCCAGATCACATTCATCATCATGATCATCGAACACCCGAGCCTCAATACGAACGACACTTTGAACCCGAACCCGAACCTGAACCACAACCGGAACACGAACAACCTTCTTCTTCAAACGGATACAATTATCCATTTCCGTATCCATATCCATATCAACAAGATTGGACTCAAACTCAACCAGGGGTTAATAATTATGCATATTATATGAAGAAATCTGCACCTCGTGGAAAATCCATGATTTACCAAGAACCGGAGAATCGTGTAGCAGCATCTGGACAATGGAATGGCTCTCCTTACGGTTATGGTTATGCTGGTATGAATGGGAATGCTGGTGGTTATTATGGTTTTCCGGCGGGGCCTTTGTCTTCTCCGGCTCCACCTCCTCCGCCTCCTGCTCCACCTTCGCCACCAAGAGTCTCAACTTGGGATTTCTTAAATTTTTTTGAGAGTGTTGATAATGGTTATTCAGCTTATGGGAATTACAGATCAGGGTTAGGGTTAGCGTCGAGTGCGAGTAGTCCTGATTCGAAAGAGGTGAGGGAGAGGGAAGGGATTCCTGAGCTAGAAGATGAAACTGAACAGGAAACGGTAAAGGAGGTGAAGGAGGCTAGTCATGAGAAGAAGAAGAAGAAAGTGGAGGAGAAAGAGGAAAAGGAAGAGGCTGATAAAGGTAGAGATTTTGGTGAAGGTACTTCGAATTCGAAGGAAGTGCCATTGCAACAGGTGAGTAGCAGTGAGGGAAGTTCCAAAACGGTGCGGTTTCATACTAGTGAAAGTAGTGGTGGTTCGAGTTCTTCTAATGAAAAAAAGAGTCCTGATAGTGTTGTTTCGAAAGGATCTCCTAGGAAGAAAGGTGTGAGTTTTGAGATTGATGGTGATGAATATGCAACTGTTACCACTGTGGAGATTGATGGCGAGGGTTCTATTTTGAGTAGCTTAACCACTTTGTCTCCACATGGAAATCGGGATCTTAAAGAGGTTGTTAGAGAAATTAGAGATGAGTTTGAGACGGCTTCTAACCATGGAAAAGAGGTTGCGTTTCTTCTTGAGGCTTGCAAACCACCTTATCAGTCAAGGGTTGCTGCATTTAGAGTTATCTTATCTAGGATCTTGCAGATGCTAGCACCTTCCGGGCCACCTTCACATCCTCCACCTGGGCCACCGATACATTTTTCTTCTAGGACAATGAAATTGGCAAAAACATACTGTGGAGAGCCTGAAAAAGAGTCAATATTAAATCCGATCAACCTTTCATCTACATTGGAGAAACTTTATGCATGGGAAAAGAAATTGTACAAGGAAGTTAAGGATGAAGAGAGGTTAAGAGCCATTTACGAGAAACAGTGCAAGAGACTAAAAGCATTGGATGATCGAGGAGCCGAATCTTCTAAAATAGATGCTACCGAGACATCAATAAGAAAGTTGCTAACAAAAATAAACATTTGCATCAGAAGTGTTGAAAAAATATCAGCCAGGATACATAAATTGAGGGACGAGGAATTGGAGCCTCAGCTTGCGGCATTAATTACTGGATTGATAAGAATGTGGAAATTCATGTTCCAGTGCCACCAGAAGCAGTTCCAGGCTATCATGGAGAGTAAAACTCAATCTCTCAAATTAAACACAGGTTTGCAAAGAGATGAAGGCTTGAAAGCTATTATGGAACTCGAAAGGGAGCTTTTAAAATGGTGCACTCAGTTCAACAAATGGGTTGGGACTCAAAAATCTTATGTTGAAAATTTGAATGGGTGGCTCGTAAGGTGCCTTCTTGATGAACCTGAAGAAACAGCTGATGGTGTTGTCCCTTTCTCTCCAAGTAGGATAGGAGCTCCGCCAGCTTTCATAATCTGCAACGATTGGCAGCAAGCAATGAATAGAATTTCAGAAAAAGAGGTGGCGGAAGCTATGGGCGAGTTTGCTCAAAAACTGCATGAGCTATGGGAGAGACAAGATGAGGAACAAAGGAGGAAAATCAGGGCGGAGTATCTCTCAGAGGATTATGAAAAACAACTTAAAGCTTTGCGCAACGAAATGGGAAGCTCAAAACAGAAGCATTGCGAAATTTCAGGAAAGACTAAATTGCCAAAGTTTACTTCTGATAGTGGTGTTTCACCACTGGATGATCTAAAGGTGGATTTAGATTCTATGAAGAAGAGATTGCATGAAGAGAGGGCCAGACATAAAGATGCCATTAGGCTTGTCCGCGATGCAGCTTCGAATAGTTTACAAACTGGTTTGATTCCCATTTTTAAGACATTAGAAAGTTTCACTTCAGAGGTGGTGAAAGCTCATGAGCAAGTCAGACTTCAAAATACCGCGGCCTAG 2697 0.4334 MGCECSKVEEFPVVTLCRERKQFLKNASDQRYALAVAHVAYMQSLKDIGEALRKFSDRDLFLPASSASSSSTFSSPVLTLPSREGKSKDGSSHHHISSSSPSHDGSGSGSHVHLSSGSEVSSPSPDHIHHHDHRTPEPQYERHFEPEPEPEPQPEHEQPSSSNGYNYPFPYPYPYQQDWTQTQPGVNNYAYYMKKSAPRGKSMIYQEPENRVAASGQWNGSPYGYGYAGMNGNAGGYYGFPAGPLSSPAPPPPPPAPPSPPRVSTWDFLNFFESVDNGYSAYGNYRSGLGLASSASSPDSKEVREREGIPELEDETEQETVKEVKEASHEKKKKKVEEKEEKEEADKGRDFGEGTSNSKEVPLQQVSSSEGSSKTVRFHTSESSGGSSSSNEKKSPDSVVSKGSPRKKGVSFEIDGDEYATVTTVEIDGEGSILSSLTTLSPHGNRDLKEVVREIRDEFETASNHGKEVAFLLEACKPPYQSRVAAFRVILSRILQMLAPSGPPSHPPPGPPIHFSSRTMKLAKTYCGEPEKESILNPINLSSTLEKLYAWEKKLYKEVKDEERLRAIYEKQCKRLKALDDRGAESSKIDATETSIRKLLTKINICIRSVEKISARIHKLRDEELEPQLAALITGLIRMWKFMFQCHQKQFQAIMESKTQSLKLNTGLQRDEGLKAIMELERELLKWCTQFNKWVGTQKSYVENLNGWLVRCLLDEPEETADGVVPFSPSRIGAPPAFIICNDWQQAMNRISEKEVAEAMGEFAQKLHELWERQDEEQRRKIRAEYLSEDYEKQLKALRNEMGSSKQKHCEISGKTKLPKFTSDSGVSPLDDLKVDLDSMKKRLHEERARHKDAIRLVRDAASNSLQTGLIPIFKTLESFTSEVVKAHEQVRLQNTAA 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02649 898 MobiDBLite consensus disorder prediction 94 123 - -
Vifa2g02649 898 MobiDBLite consensus disorder prediction 124 154 - -
Vifa2g02649 898 Pfam Protein of unknown function (DUF630) 1 58 IPR006868 -
Vifa2g02649 898 MobiDBLite consensus disorder prediction 357 398 - -
Vifa2g02649 898 MobiDBLite consensus disorder prediction 64 167 - -
Vifa2g02649 898 PANTHER UNCHARACTERIZED 1 893 - -
Vifa2g02649 898 MobiDBLite consensus disorder prediction 291 410 - -
Vifa2g02649 898 MobiDBLite consensus disorder prediction 64 81 - -
Vifa2g02649 898 Coils Coil 830 850 - -
Vifa2g02649 898 Coils Coil 781 808 - -
Vifa2g02649 898 MobiDBLite consensus disorder prediction 318 354 - -
Vifa2g02649 898 Pfam Protein of unknown function (DUF632) 448 768 IPR006867 -
Vifa2g02649 898 Coils Coil 321 346 - -
Vifa2g02649 898 Coils Coil 559 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02649 Vifa-Chr2 707425911 707429227 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02649 253 784 Acyl Lipid Metabolism Gene Families AT2G27090 28.000 1.18e-45 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02649 - - aprc:113852495 999.579