Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02631 ATGGCTCAAACTATGTTGCTCATGTCTAGTGTCTCCAGCACCTATTCTGTTACCTTGAACAAAGATCCTTTGCTTCAATTACAGTGTCAAAGATTGAAGCCTAGGTTTTCTGATATCTCATTCAACCCACTTTCTTCTAATTCAAAGTCTTTTTCATCTCGCACATTTAAAACTCTGGCTCTATTCAAATCAAAGACCAAAGCCCCTGCTAAGGTTGTACCTAAACCAAAACCAAAGGTTGAAGATGGTGTGTTTGGAACTTCTGGTGGATTTGGCTTCACTAAACAGAATGAACTTTTTGTTGGTCGTGTTGCTATGATCGGTTTTGCGGCATCAATTTTGGGTGAAGCAGTAACCGGCAAAGGAATTCTATCACAATTGAATTTGGAAACTGGTATTCCAATTTATGAAGCTGAGCCTCTCCTCTTATTTTTCATCATTTTCACACTTCTAGGAGCCATTGGAGCTCTAGGTGACCGTGGTAAATTCGTCGATGATGAACCTACTACCGGAGGCGTTATTCCTCCTGGAAAAGGCTTTAGAGCAGCTCTCGGTCTCAGCGAAGGAGGCCCTTTATTCGGATTCACCAAATCCAATGAACTGTTTGTTGGAAGATTGGCTCAATTGGGATTTGCTTTCTCTTTGATCGGAGAGATTATTACCGGAAAGGGAGCACTAGCTCAACTCAACATTGAAACCGGTGTACCAATCAATGAGATTGAACCACTAGTGTTGTTCAATGTTGCTTTCTTCTTCATTGCGGCTTTGAATCCTGGAACTGGCCAGTTTGTAACTGATGACGAAGAAGATTAG 813 0.4157 MAQTMLLMSSVSSTYSVTLNKDPLLQLQCQRLKPRFSDISFNPLSSNSKSFSSRTFKTLALFKSKTKAPAKVVPKPKPKVEDGVFGTSGGFGFTKQNELFVGRVAMIGFAASILGEAVTGKGILSQLNLETGIPIYEAEPLLLFFIIFTLLGAIGALGDRGKFVDDEPTTGGVIPPGKGFRAALGLSEGGPLFGFTKSNELFVGRLAQLGFAFSLIGEIITGKGALAQLNIETGVPINEIEPLVLFNVAFFFIAALNPGTGQFVTDDEED 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02631 270 FunFam Photosystem II 22 kDa protein, chloroplastic 138 240 - -
Vifa2g02631 270 FunFam Photosystem II 22 kDa protein, chloroplastic 58 137 - -
Vifa2g02631 270 Gene3D Chlorophyll a/b binding protein domain 52 135 - -
Vifa2g02631 270 SUPERFAMILY Chlorophyll a-b binding protein 79 249 - -
Vifa2g02631 270 Gene3D Chlorophyll a/b binding protein domain 136 241 - -
Vifa2g02631 270 Pfam Chlorophyll A-B binding protein 89 215 IPR022796 -
Vifa2g02631 270 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 71 131 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02631 K03542 - gmx:100807355 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02631 2 703777246 703778460 Vifa2g02631 2 703777246 703778460 ECH