Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02627 ATGTCTCGCTCTTCTCCATTATCAGCAATGTTGTTATGGCATGTCATTGCATGCTTTCTATTTGTTTCCAATTTGGCATCTGCTTCAAGACTTAATCATTCAAAAACAAGAAATGAAGTAATCATTGCTCATCATGGAGCTGTTGCGACCGACGACCGTCGATGCTCTAAGATTGGGAAGGATGTTATTGTTGAAGGGGGGCATGCAGTGGATGCAGCTGTGGCTGCTGCCCTTTGTTTGGGGGTTGTTAGTCCGGCTTCAAGTGGTATAGGTGGTGGTGGCTTTATGCTGATCAGGTTAGCTAATGGAGTAGCAAAGGCTTTTGATATGAGAGAAACTGCTCCTCTTCTTGCTTCCAAGGATATGTATGGTGGCAATACTACTTTGAAGGAAACAGGTGGCCTCTCAGTAGCAGTTCCAGGAGAACTAGCAGGCCTTCACAAGGCATGGAAACAACATGGGAAGATTCCATGGGAGAGACTTGTAAAGCCAGCTGAGATTCTTGCTTTTAGAGGGTTTAAAATATCACCATACCTTTACACACAGATGAAAAGATCAGAGTCAGGTATATTAAACGATAACGGTCTTCGTAGTGTTTTTGCACCACATGGAAAACTCTTGGAGGTAGGTGAAATATGCTACAATAAACAACTAGCAAAAACTCTCGGAGCAATTTCAAAGTTCGGTCCACAAGTTTTTTACGGCGGAATAATTGGGATTAAGTTAGTTCAAGATGTTCAAAAAGCCGGAGGGATATTGACTATAAAAGATCTCAAAAGTTACACTATTAAAGAAAAAGAACCTATATCTATAGATTTTCTTGGATTGAAGATCCTTGGCATGCCTCCTCCTTCTGGTGGACCTCCATTGATGCTGCTGCTGAACATTCTAGCACAATATGAACTTCCTTCGGGACTTTCTGGTGCATTAGGGATCCATAGAGAAATCGAGGCTTTGAAACATGTTTTTGCTGTGAGAATGAATCTTGGTGATCCTGATTTTGTAAATGTAACTGATGTTCTTTCTGATATGCTCTCTACTAAGTTTGCGAAAGAGTTGAGAAAAGACATCAATGATAATAGGACTTATAATTCAAGTCATTATGGTGGCAAGTGGAATCAGATAAATGATCATGGTACAAGTCATTTAAGCATAATAGACTTCAAGGGAAATGCTGTTTCCATGACTTCTACCGTAAATGCGTATTTTGGTGCAAAGATTCTTTCACCAAGTACAGGAATAGTGTTAAACAATGAGATGGATGATTTTTCAATGCCTATGAATGCTTCCAAAGATGTTCCACCACCAGCTCCCGCCAATTTCATCGTGCCGGGGAAGCGACCATTATCATCCATGTCACCGATCATTGCCCTCAAGGATGGGAAAGTGAAAGCAGTAGTAGGTGCAAGTGGGGGAATTATGATTATTGCTGCAACTTCAGAAGTTCTTTTGAATCATTTTGTCAAAGGAATGGATCCGTTTTCTTCTGTAACGGCTCCGAGGGTCTATCACCAGCTGATACCTAACGTGGTTTATTATGAGAATTGGACAACGGGACTTGCTGGTGGGACAATATGCCAACTTATAGTTGCTGACATTTCTGAGCATTCTGGAAGAAACAAAGGTATTGGAAAGCTTGTGGCAGTAAGTGATCCTAGAAAGGGTGGTTTTCCTGCAGGCTTTTGA 1686 0.4128 MSRSSPLSAMLLWHVIACFLFVSNLASASRLNHSKTRNEVIIAHHGAVATDDRRCSKIGKDVIVEGGHAVDAAVAAALCLGVVSPASSGIGGGGFMLIRLANGVAKAFDMRETAPLLASKDMYGGNTTLKETGGLSVAVPGELAGLHKAWKQHGKIPWERLVKPAEILAFRGFKISPYLYTQMKRSESGILNDNGLRSVFAPHGKLLEVGEICYNKQLAKTLGAISKFGPQVFYGGIIGIKLVQDVQKAGGILTIKDLKSYTIKEKEPISIDFLGLKILGMPPPSGGPPLMLLLNILAQYELPSGLSGALGIHREIEALKHVFAVRMNLGDPDFVNVTDVLSDMLSTKFAKELRKDINDNRTYNSSHYGGKWNQINDHGTSHLSIIDFKGNAVSMTSTVNAYFGAKILSPSTGIVLNNEMDDFSMPMNASKDVPPPAPANFIVPGKRPLSSMSPIIALKDGKVKAVVGASGGIMIIAATSEVLLNHFVKGMDPFSSVTAPRVYHQLIPNVVYYENWTTGLAGGTICQLIVADISEHSGRNKGIGKLVAVSDPRKGGFPAGF 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02627 561 PRINTS Gamma-glutamyltranspeptidase signature 404 422 - -
Vifa2g02627 561 PRINTS Gamma-glutamyltranspeptidase signature 136 154 - -
Vifa2g02627 561 PRINTS Gamma-glutamyltranspeptidase signature 281 300 - -
Vifa2g02627 561 PRINTS Gamma-glutamyltranspeptidase signature 444 459 - -
Vifa2g02627 561 PRINTS Gamma-glutamyltranspeptidase signature 68 93 - -
Vifa2g02627 561 PRINTS Gamma-glutamyltranspeptidase signature 252 268 - -
Vifa2g02627 561 PRINTS Gamma-glutamyltranspeptidase signature 380 398 - -
Vifa2g02627 561 PRINTS Gamma-glutamyltranspeptidase signature 468 485 - -
Vifa2g02627 561 PRINTS Gamma-glutamyltranspeptidase signature 154 173 - -
Vifa2g02627 561 Pfam Gamma-glutamyltranspeptidase 61 519 - -
Vifa2g02627 561 Gene3D - 268 372 IPR043138 -
Vifa2g02627 561 NCBIfam gamma-glutamyltransferase 48 516 IPR000101 GO:0006751|GO:0036374
Vifa2g02627 561 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 38 561 IPR029055 -
Vifa2g02627 561 PANTHER GAMMA GLUTAMYL TRANSPEPTIDASE 13 561 IPR000101 GO:0006751|GO:0036374
Vifa2g02627 561 ProSitePatterns Gamma-glutamyltranspeptidase signature. 380 404 IPR000101 GO:0006751|GO:0036374
Vifa2g02627 561 FunFam Gamma-glutamyltransferase 5 isoform 1 268 372 - -
Vifa2g02627 561 Gene3D - 375 561 IPR043137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02627 Vifa-Chr2 701356026 701359267 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02627 10 561 Miscellaneous Gene Families AT4G39640 61.207 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02627 K18592 - gmx:100797040 841.647