Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02613 ATGGAGTCCCAAACTCCAAGATCCGAATCACAAACCGACCCTCTCCACAACCCATCCATCAAAAACCCCTTAGACGCACTCTGCCACGATCTCCACTCCCTCCAAGACCTAGCCAACCGCGGCGCGTGGCGTTCCATCATCGACAAAGTCTCACGCGCCAGAGCCCTCTCTCTTCTCCAAAAACCCCACGACCACCTCACCTACCTCGCCTTCAACGCCCTTGCTTTCACCAAACTACGTCGTTTCAACGAAGCTTCTTCGGAACTCGATTCCGTCGAAGATCTCGAAAGTTCGCATTACCAATACGAAACCTACCCGAAAATCTACCCTAATCGTGTAGGATCTATGGTTCCTTTTTCCCTCCGGTGGCTCCACGCCCTAATTCCGATCAAATTAGGGCAACGGCAACAAGGAATCGATCGGTTATACGGTCTCCTCGATTTCGTGCGGGAGAAGATACACACCAAGGAAAACAACAATCTAACCGATTCGGTTCGGGTTTGGCGTAAAAGAGAGGTTTTTGTTGTGAATTGTATAATTGGTCACCATTTGAGTCACAAGGAATTTGGTGTTTGTTTAAGCTTGATGAAAAGCTTACTCTCTCGCGATTCTACTGATCCTTATTTGATTTCGCAACTTGGGTATATTCAATTACAAACCGGTGACTTGGAAGGTGCGAAAGCTTCGTTTTTGAAAGCCGAAGTTGATGGGAAGAACAATGGGTCGTTGAGTGAGGTTGAGTTTATGAATCTTGTGAATAGAAACAAGGCTTTGGTGTATATGGTTGGGAAAGATTATGTATCTGCGGTGAGGGAGTATGAAGAGTGCATTGTAAGGGATCATAGTGATATAGTGGCTTTTAACAATAAAGCTCTTTGTTTGATGTATTTGAGGGATTTGTCTGATTCAATCAAGGTGTTGGAAAATGCTCTTGAAAGGGTTCCTACGGTTGCGCTCAATGAGACGCTGGTTGTTAATTTGTGTAGTATGTATGAGTTGGCTTATGTTAATCACTCAGATATTAAGAGGACGCTTAGTAGTTGGATTGCTCGTGTTGCTCCTGATGATTTCGATTCAACATGTACTCGAACATGA 1095 0.4475 MESQTPRSESQTDPLHNPSIKNPLDALCHDLHSLQDLANRGAWRSIIDKVSRARALSLLQKPHDHLTYLAFNALAFTKLRRFNEASSELDSVEDLESSHYQYETYPKIYPNRVGSMVPFSLRWLHALIPIKLGQRQQGIDRLYGLLDFVREKIHTKENNNLTDSVRVWRKREVFVVNCIIGHHLSHKEFGVCLSLMKSLLSRDSTDPYLISQLGYIQLQTGDLEGAKASFLKAEVDGKNNGSLSEVEFMNLVNRNKALVYMVGKDYVSAVREYEECIVRDHSDIVAFNNKALCLMYLRDLSDSIKVLENALERVPTVALNETLVVNLCSMYELAYVNHSDIKRTLSSWIARVAPDDFDSTCTRT 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02613 364 FunFam Trafficking protein particle complex subunit 12 175 346 - -
Vifa2g02613 364 Gene3D Tetratricopeptide repeat domain 177 345 IPR011990 GO:0005515
Vifa2g02613 364 SMART tpr_5 284 317 IPR019734 GO:0005515
Vifa2g02613 364 SMART tpr_5 207 239 IPR019734 GO:0005515
Vifa2g02613 364 SMART tpr_5 250 283 IPR019734 GO:0005515
Vifa2g02613 364 SUPERFAMILY TPR-like 197 318 IPR011990 GO:0005515
Vifa2g02613 364 PANTHER D-ALANYL-D-ALANINE CARBOXYPEPTIDASE 4 362 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02613 K20309 - gmx:100779691 585.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02613 2 694517151 694518245 Vifa2g02613 2 694517151 694518245 ECH