Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02601 ATGGCAAACCCAACTCATATCTTCGCTCTCCTCTTTCTATTCTCATTTTTCTTCGCCGGAATCGTCACATCTGAGGAGGACTGTGTCTACACGGTGTACGTCAGAACCGGGTCAATCCTCAAGGCAGGAACAGACTCAAACATAATCCTCACCTTATACGATGCAAAAAACTACGGCATAAGAATCAACAACCTTGAAGCATGGGGCGGGTTAATGGGTCCGGGTTACAACTACTTCGAGCGGAGCAACCTTGACATATTCAGCGGCAGAGGACCTTGTTTGGACGCACCCGTTTGCAAGATGAACTTGACTTCAGACGGGGCGGGTAGTCATCACGGTTGGTATGTTAATTATGTTGAGGTTACTACAACTGGGGTCCACTCTCCATGTGCTCAGACTCTCTTCACCGTGGAACAGTGGCTGGCTACCGACACGTCGCCGTATGAGCTTTATTCTGTTAAGGACAACTGCCCGTATAAGGTGGACCAGGCCGAGGCGAAACTGAAGACGGTTGATGCCGTCAGATCTGGATCTGGTTTCTCTATCTTGGGTTCGACCGTGCGCGTGTAG 570 0.5 MANPTHIFALLFLFSFFFAGIVTSEEDCVYTVYVRTGSILKAGTDSNIILTLYDAKNYGIRINNLEAWGGLMGPGYNYFERSNLDIFSGRGPCLDAPVCKMNLTSDGAGSHHGWYVNYVEVTTTGVHSPCAQTLFTVEQWLATDTSPYELYSVKDNCPYKVDQAEAKLKTVDAVRSGSGFSILGSTVRV 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02601 189 PANTHER PLAT DOMAIN-CONTAINING PROTEIN 25 166 - -
Vifa2g02601 189 CDD PLAT_plant_stress 28 156 - -
Vifa2g02601 189 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 29 146 IPR036392 GO:0005515
Vifa2g02601 189 Gene3D PLAT/LH2 domain 19 147 - -
Vifa2g02601 189 ProSiteProfiles PLAT domain profile. 28 155 IPR001024 GO:0005515
Vifa2g02601 189 Pfam PLAT/LH2 domain 30 149 IPR001024 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02601 Vifa-Chr2 689629658 689630310 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02601 - - gmx:100793024 255.758