Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02579 ATGTGCATGACAAAACCATACATGTTTTTGACGTGTGTTATTCCAGGCCCACACAGTCCAAAAGCCGGAAGTAATGTGTACTTACAACCTTTAATTGATGATTTGAAGAAGATGTGGATTGGAGAATGGACTTATGATATATCCCGTAAACAGAACTTCACATTACGAGCTGCCTTTCTGTGGACCGTTAATGACTTTCCAGCATATGGCATGTTGTCTGGTTGGGATGGAGCTGATATTCGTGAGAGATCAGATGATCCGAGTGAGATTCATGTCATTGACGGGAGGTTTTGGATTTGGCCCGAAGGAAGCAATTTCGCGCCGAGTCGGACGGCTGCCAAGGATATGGGGAGACCACCATTGATCATTGAGTTGATTACGAGGACTCGGACAAAGAAATCGGGAGGTTTTGTCGACGACCGCACCCAGAAAGCTTTTGATGATTATCAGACATTGCTAGCACGAAACAACAAAAGAATCAAACTTAATAGCAAAACCGTGTCTACCAAATCGGTACCCTTTTGGGACAAGTCTTTCAATCTAGATTGTTCTTGTCCTCGAGAGTTTTTGGGAATACTTAATCAACAAAACCTAGAGTTGGAGCTAAGACAGAGGAAGATGTGGGGGTCACAACTTATTGGAAAAGGTGAGATTCCATGTAAGTCGATTTTTCAATCACAAAACATGGAGTTAAAAAAATGGTTGAAAATGGATTTGATGAGTGGAAGTGATTGCAAAGAGGTTATGTTGACAACACCCAAAGTGGAAGTAGAGATTAAAGTTAAAGTGTCTTCGGTTGCTGAGATGGAGAAGCAAAATACAAAGAGGTTTAATAATTTGAATGAGTGTGGATGTAAAAATTGCCATGATCATAATACTTGGTGCAGCGTCGAAGAATGTGATATATTTGCGCTTGGTGCAGCTTTGGAGGCTTTTTGA 939 0.4121 MCMTKPYMFLTCVIPGPHSPKAGSNVYLQPLIDDLKKMWIGEWTYDISRKQNFTLRAAFLWTVNDFPAYGMLSGWDGADIRERSDDPSEIHVIDGRFWIWPEGSNFAPSRTAAKDMGRPPLIIELITRTRTKKSGGFVDDRTQKAFDDYQTLLARNNKRIKLNSKTVSTKSVPFWDKSFNLDCSCPREFLGILNQQNLELELRQRKMWGSQLIGKGEIPCKSIFQSQNMELKKWLKMDLMSGSDCKEVMLTTPKVEVEIKVKVSSVAEMEKQNTKRFNNLNECGCKNCHDHNTWCSVEECDIFALGAALEAF 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02579 312 Pfam C2 domain 160 230 IPR000008 -
Vifa2g02579 312 Gene3D C2 domain 130 277 IPR035892 -
Vifa2g02579 312 Pfam Plant transposase (Ptta/En/Spm family) 112 171 IPR004252 -
Vifa2g02579 312 Pfam Transposase family tnp2 1 77 IPR004242 -
Vifa2g02579 312 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 159 261 IPR035892 -
Vifa2g02579 312 PANTHER OSJNBA0006M15.15 PROTEIN 153 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02579 Vifa-Chr2 683462015 683474642 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02579 - - gmx:100807677 189.889