Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02542 ATGGAACTTGTATTTACCAAATGGGCTTGCGCATTCTTACTGTCTTGTTTTCTCATCACTTGTAGAGTATATTCAGTGGAGGGGTTACTTAGAGATTCTAAAGTTAGAGGAGTGAACTTAGGTGGCTGGCTGGTTATTGAAGGTTGGATCAAACCTTCATTGTTTGATGCCATTGCCAATGGAGACATGCTTGATGGGACAGAGGTGCAGTTTAAGTCGGTGACATTACAGCAATATGTATCTGCAGACAATGGTGGAGGAATGAATGTGACAGTTGATAGAGATGTTCCATCTTCATGGGAAACATTCAGGTTGTGGAGAGTATCACAATCAGAATTTCAATTCCGTACCGCACAAGGCCAATTTCTTACATGTGATGGCGGAGGCTGCACTGTCTCTGCAACAGCAAAATCGCCTTCAACATCAGAGACATTTGAAGTTCAGCGTAATGAGAAAAATAGGATTCACATCAAGATAAAGAACGGGCCTTATCTACAGGTTACAACTGGTAATCAGCTCGCAGCAAACTATCCAGGTGCACCGGGATGGGATGATAATTCAGCCACATTTGAAATGACAATGGTATCAAATAACCTTCATGGAGATTATCAACTAGCAAATGGTTATGGACATGATAGCGCAGAGGATGTTCTTAGGCGACATAGAAATAGCTTTATTACAATAGAGGATTTCAAATTTCTATATGAACATGGAATAAATACTGTGAGGATTCCGGTTGGGTGGTGGATTGCTTTTGATCCTGATCCTCCAAGTCCATTTATTGGAGGAAGTCTTGAAGCTCTAGATAATGCATTTTCATGGGCACAAGAATATGATATAAAATGCATAATTGACCTTCATGCTGCTCCTGGTTCACAAAACGGGATGGAACATAGTGCAAGCAGAGATGGATTTACTGGATGGCCAACTTCTCCTGATTACATTTCAAAGTCATTACATGTTATCGAGTTTTTAATTTCTCGATATGCGAAGCATCCTGCCTTGCTTGGAATTGAACTTTTGAATGAACCATCGGCTGGCACAGTTTCCGTAGATATTTTAATTTCTTACTACAAGCAAGGCTATCAAATTGTTCGGAAATACTCGCCATCAGCTTATGTGATAGTGTGCCAGAGAATTGGCAATGCAGATCCTTTGGAGCTTTATCAAGCCAACATAGGATCTACCAATTTAGTATTGGATTTGCATTTCTACAACCTTTTTGACACATTCTTTGTTAATATGAGCACCACCGATAATATACAATACATATACAAAAGTAGGGAAAATATGTTGCAGGCCTTCAACAATTCAAATGGCCCACTCGTTTTTATCGGAGAGTGGGTGAATGAGTGGAATGTGACAAGCGGATCCCAAACAGATTATCTTGAGTTTGGAAAGGCACAGTTAGATGTGTATAATGCAGTGTCGTTTGGTTGGTGTTATTGGACTATAAAGAATGACAGGGAGCACTGGGATTTTGAATGGAACATTAGAAAGAACTATCTTCAATTTGGTAACTCCCCCAGAAAACAGAACATATACACTCTGGGATTGTTTGGATTGGCTTTCACCTGGTTTTGTCTTCACTTTTTGTGA 1599 0.399 MELVFTKWACAFLLSCFLITCRVYSVEGLLRDSKVRGVNLGGWLVIEGWIKPSLFDAIANGDMLDGTEVQFKSVTLQQYVSADNGGGMNVTVDRDVPSSWETFRLWRVSQSEFQFRTAQGQFLTCDGGGCTVSATAKSPSTSETFEVQRNEKNRIHIKIKNGPYLQVTTGNQLAANYPGAPGWDDNSATFEMTMVSNNLHGDYQLANGYGHDSAEDVLRRHRNSFITIEDFKFLYEHGINTVRIPVGWWIAFDPDPPSPFIGGSLEALDNAFSWAQEYDIKCIIDLHAAPGSQNGMEHSASRDGFTGWPTSPDYISKSLHVIEFLISRYAKHPALLGIELLNEPSAGTVSVDILISYYKQGYQIVRKYSPSAYVIVCQRIGNADPLELYQANIGSTNLVLDLHFYNLFDTFFVNMSTTDNIQYIYKSRENMLQAFNNSNGPLVFIGEWVNEWNVTSGSQTDYLEFGKAQLDVYNAVSFGWCYWTIKNDREHWDFEWNIRKNYLQFGNSPRKQNIYTLGLFGLAFTWFCLHFL 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02542 532 SUPERFAMILY Actin-crosslinking proteins 69 183 IPR008999 -
Vifa2g02542 532 Gene3D - 47 188 - -
Vifa2g02542 532 ProSitePatterns Glycosyl hydrolases family 5 signature. 336 345 IPR018087 GO:0004553|GO:0005975
Vifa2g02542 532 Gene3D Glycosidases 189 513 - -
Vifa2g02542 532 Pfam Cellulase (glycosyl hydrolase family 5) 226 488 IPR001547 GO:0004553|GO:0071704
Vifa2g02542 532 PANTHER FASCIN 32 504 IPR010431 GO:0007015|GO:0051015
Vifa2g02542 532 SUPERFAMILY (Trans)glycosidases 33 509 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02542 Vifa-Chr2 671519582 671522966 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02542 - - tpra:123911124 969.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02542 2 671519582 671522966 Vifa2g02542 2 671519582 671522966 ECH