Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02539 ATGAAGAAACTGAAAGAGGTGATAGGAAAAATGAAGGACAAAGCATCACAAAGCAAAGCTGCAATTTTATCGAAACAAAAAACTCTTTCTCTCTTACGCGCCACAACCCACGACTCTTTTGCCCCTCCGACACACAAACACCTTAGCACCCTTCTCTCCTCTGGCGACGGTTCACGCGCCACCGCATCTACCGCCGTCGAGCTTCTCATGGACCGCCTCCAAACGACTCACAACTCAGCCGTGGCTCTTAAATGCTTAATCGCCGTCCACCATATTATCAAACGTGGCACGTTCATTCTCCGTGACCAGCTTTCTGTTTACCCTTACACCGGTGGTAGAAACTATCTCAACCTCTCTAACTTCCGTGATAAAACAAGTTCGATCTCATGGGAACTCTCTTCTTGGGTTCGATGGTACGCGGAATATATAGAACACCTTCTGTGTGCTTCTAGAACACTCGGTTACTTTCTCCGGGAAACGACAACGGTTAAGGAGACGCATGAGGAAAGAGTTTCGAGTCTTGTGACTGGTGATCTGTTGAGAGAAATAGATTCTCTGGTGGCGATGATGGAAGGGATTGGGAAAAGACCAAATATTCCAACAATGGAACAGAAGAACAAGGTGGTTGTTGAGATAATGGATTTGGTGGAAGATGATGAAGTTGTGGTTGTGAATGAAGTTTTGGTTAGAGTTAAGGAATTTGGGGAGAGGGAGAGATTGGGTTCTCTTGGGTTTGGAGAAGTTGTGGAGTTGGTTTGTGTTTTGAAGAGATTGGAGATGTGTAGAGAGAGAATGGTGACGGTGATGGAGGAGAAGAGGTTTTGGAATTTGGTGATAGAATTGAAGGAAAAGGTTGGGAAGATGAAGGTGTATAGGGATGAAGGGAAGGTTTACAGAACGGTGGGAAAAGACAGAGGAACTGAGTCTGTTCGGTTTTGA 939 0.4537 MKKLKEVIGKMKDKASQSKAAILSKQKTLSLLRATTHDSFAPPTHKHLSTLLSSGDGSRATASTAVELLMDRLQTTHNSAVALKCLIAVHHIIKRGTFILRDQLSVYPYTGGRNYLNLSNFRDKTSSISWELSSWVRWYAEYIEHLLCASRTLGYFLRETTTVKETHEERVSSLVTGDLLREIDSLVAMMEGIGKRPNIPTMEQKNKVVVEIMDLVEDDEVVVVNEVLVRVKEFGERERLGSLGFGEVVELVCVLKRLEMCRERMVTVMEEKRFWNLVIELKEKVGKMKVYRDEGKVYRTVGKDRGTESVRF 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02539 312 CDD ANTH_N_AP180_plant 29 150 - -
Vifa2g02539 312 Gene3D - 3 155 IPR008942 -
Vifa2g02539 312 ProSiteProfiles ENTH domain profile. 19 157 IPR013809 -
Vifa2g02539 312 SUPERFAMILY ENTH/VHS domain 30 154 IPR008942 -
Vifa2g02539 312 FunFam Putative clathrin assembly protein At4g40080 3 156 - -
Vifa2g02539 312 Pfam ANTH domain 30 215 IPR011417 GO:0005543
Vifa2g02539 312 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 225 IPR045192 GO:0048268|GO:0072583
Vifa2g02539 312 SMART enth_2 25 157 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02539 Vifa-Chr2 670065686 670066624 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02539 - K20043 tpra:123917017 340.117