Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02525 ATGGCGGAGCTCCGTCACTCCTCCTCAATCGGCTCCCGAACCGCTTCTTCTCCGATGAAGCGCGACAGCGCTGGCGCCGGCGATTCTTCCCCGCTAATTCCCGAAAACGATCTTTCCGACGACGATCGTCACTCTCCTAAAGACCGTGACCGTCCTCCCTGCTCGCATTTTCATCACCTTTGCTCCTACTTCACCGATGACCATAGGGTTCCGTTTCACAACTCCAGGATCTCGATGTTCTTCACGTTACTTCTAGTTCTTGCTGGCTTGCTCGGTTTATTAACGATCCTCCATAAATTGAACTCGCCTTACTTGTGTAAAAAGGATGGGATTGTTCTTCACTGTCCACATGTCAAAGAATCAGCATCTCTTTGGGAAAATCCTTACTCATCCACAACATCGTGGAAGCCATGTGCTGAGCGAAGGGATGGTGCCATATCAGAACTTCCTCATGAAAATGCAACAAATGGCTATATATTCATTCACGCTGAAGGTGGTCTAAATCAGCAAAGAATTGCGATATGCAATGCAGTGGCTGTTGCAAAAATAATGAATGCCACTCTTATTTTGCCTGTATTGAAACAGGACCAAATTTGGAAAGACCAAACGAAATTTGAAGACATTTTTGACGTGGACCACTTCATTGACTACCTAAAGTATGATGTCCGTATTGTCCGCGATATCCCAGAATGGTTTACTGATAAAACAGAGCTATTTTCTAGTATAAGACGAACTGTGAAGAACATTCCAAAATATGCACCTGCACAATTTTACATCGACAATGTCCTGCCTCGCATCAAGGAGAAAAAGATTATGGCTCTGAAACCATTTGTTGATAGGCTAGGATATGACAATGTTCCTTCAGAAATCAACAAGTTGAGATGTAGGGTCAATTATCATGCTCTGAAGTTTCTTCCTGATATTGAGCAGATGGCAGATTTACTAGCATCGAGGATGAGAAACAGAACAGGCAGTTCAAACCCATATATGGCATTGCATCTTAGATTTGAGAAAGGAATGGTGGGCCTATCTTTTTGTGATTTTGTGGGGACAAGAGACGAGAAAGCTAAAATGGCAGAGTATAGAAAAAAGGAATGGCCTCGACGGTATAAGAATGGTTCCCACTTGTGGCAATTGGCTCTGCAGAAGCGAAAGGAAGGGCGTTGCCCTCTAGAGCCTGGCGAAGTGGCTGTTATTCTTCGGGCTATGGGCTATATGAAGGAAACTCAAATTTACGTAGCTTCTGGACAAGTTTATGGTGGACAGAATCGGATGGCTCCTCTAAGGAATATGTTCCCTAATCTGGTTACAAAGGAGGAGTTGGCAACTAAAGCGGAGTTAGATGGTTTCAGAAAGCATGTGACGAGCCTTGCAGCTCTTGATTTCTTAGTGTGCTTGAAGTCAGATGTATTTGTGATGACCCATGGAGGCAATTTTGCTAAGCTGATAATTGGGGCCCGAAGATACATGGGGCACCGTCTAAAGTCAATTAAGCCTGACAAAGGACTAATGTCCAAGTCTTTTGGGGATCCGTACATGGGTTGGGCTCCTTTTGTAGAAGATGTTATTGTGACTCATCAGACACGGACGGGATTGCCAGAAGAGACTTTCCCTAACTACGACCTGTGGGAGAACCCTCTGACTCCTTGCATGTGTAAAGCCTGA 1665 0.4462 MAELRHSSSIGSRTASSPMKRDSAGAGDSSPLIPENDLSDDDRHSPKDRDRPPCSHFHHLCSYFTDDHRVPFHNSRISMFFTLLLVLAGLLGLLTILHKLNSPYLCKKDGIVLHCPHVKESASLWENPYSSTTSWKPCAERRDGAISELPHENATNGYIFIHAEGGLNQQRIAICNAVAVAKIMNATLILPVLKQDQIWKDQTKFEDIFDVDHFIDYLKYDVRIVRDIPEWFTDKTELFSSIRRTVKNIPKYAPAQFYIDNVLPRIKEKKIMALKPFVDRLGYDNVPSEINKLRCRVNYHALKFLPDIEQMADLLASRMRNRTGSSNPYMALHLRFEKGMVGLSFCDFVGTRDEKAKMAEYRKKEWPRRYKNGSHLWQLALQKRKEGRCPLEPGEVAVILRAMGYMKETQIYVASGQVYGGQNRMAPLRNMFPNLVTKEELATKAELDGFRKHVTSLAALDFLVCLKSDVFVMTHGGNFAKLIIGARRYMGHRLKSIKPDKGLMSKSFGDPYMGWAPFVEDVIVTHQTRTGLPEETFPNYDLWENPLTPCMCKA 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02525 554 PIRSF UCP009360 40 554 IPR024709 -
Vifa2g02525 554 CDD O-FucT_plant 158 493 IPR024709 -
Vifa2g02525 554 MobiDBLite consensus disorder prediction 36 51 - -
Vifa2g02525 554 Gene3D - 299 497 - -
Vifa2g02525 554 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 101 553 - -
Vifa2g02525 554 MobiDBLite consensus disorder prediction 1 51 - -
Vifa2g02525 554 Pfam GDP-fucose protein O-fucosyltransferase 158 490 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02525 Vifa-Chr2 666891744 666898005 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02525 124 553 Miscellaneous Gene Families AT1G22460 35.477 3.51e-91 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02525 - - gmx:100809112 1015.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02525 2 666891744 666898005 Vifa2g02525 2 666891744 666898005 ECH