Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02511 ATGGATGGGAGAGTCCAACCCCTGAAACTACTAACTGAGGAGTCTATGAAAAAGTTACTCAACAGAAGATGGACACTGCCAACCCCTGAAACTAAAATTCATCAAGTAATTCACACACATAGATTGGATGGTAGTAATTTCTTCCAATTGAACACCAATCCAGATTTTGAACAAAGGAAGAGCTTTTATGTCGTGCGGGATGATTTGTTGCATCCGCTAATTAATGGCAATAAAGCAAGAAAATTGGATGGATTGCTTCCCTTGCTTCAAGATCATTCAGTCACTGATGTGGTTACCTGTGGAGGTTGTCAGAGTGCTCACACAGCTGCTATTGCTGTTCTGTGTGCTGAGAGAGGAATTACGTCACATCTGCTTCTACGAGGAGAGCAGCCTGAAATCTTGACTGGCTATAACTTGATGTCTACAATATATGGAAATGTCACATATGTTCCGAGAACTATGTATGCCAACAGGGAAGAAATGCTAAAGAACTATGCTAGGTCAGTGGCCGGAAACAGTGGTGCTTTCCTATGGTTCAATGATATCATTCAAGCTTCTTCAACAGGCGAATTGTCTACTTCTCAAAATTTTACGAAAATGGACGCAAGTAGAAGTGAGAGAAACCATCTTCAAAAGATTTTAGTTGTCAACGAAGGGGCAGGTGATTCTGTTGCTCTACTAGGTATTATTCGGTTAGTGCAATACTTATCACAAAATCATTTACTTGGGAAACAAAGAGCCACAAAATTTGTCGTTGATGCTGGTACTGGCACAACAGCTATTGGTATAGGACTTGCAGCCATTTTCTTTGGACTTCCGTGGGAGGTACACGCGGTTATGCTGGCAGATAAAATTGATGGGTACCGAAAGCAGGAAAAGCACTTGATTGTTGAATTCAGTAAGCATTTCAATGTTGAGTTTCTTGACCACGACGTAAACAAAGAAGATGCTGGGATTGTGCATTGGGTGGAACGTGACCGTCCAAGAAAGTTCGGTAATATTTTGGACGGCGAAATGGTAGTATGTCAGCAAATTGCGCAGCAAACTGGGATTCTAGTGGATCCTGTTTACACATTAGCTGCTTGGGAAAAGGCAATGCTTCTCTCTAGCAAAGAGGATGAAGAAGGAGCAGAAGTGGTGATGCTTCATACTGGAGGCACGTTAGGCATGTTTGGGTTGGCGCAGAGGTACAAAAAATATTTTGGCATGCTCAAAAAGTGA 1221 0.4201 MDGRVQPLKLLTEESMKKLLNRRWTLPTPETKIHQVIHTHRLDGSNFFQLNTNPDFEQRKSFYVVRDDLLHPLINGNKARKLDGLLPLLQDHSVTDVVTCGGCQSAHTAAIAVLCAERGITSHLLLRGEQPEILTGYNLMSTIYGNVTYVPRTMYANREEMLKNYARSVAGNSGAFLWFNDIIQASSTGELSTSQNFTKMDASRSERNHLQKILVVNEGAGDSVALLGIIRLVQYLSQNHLLGKQRATKFVVDAGTGTTAIGIGLAAIFFGLPWEVHAVMLADKIDGYRKQEKHLIVEFSKHFNVEFLDHDVNKEDAGIVHWVERDRPRKFGNILDGEMVVCQQIAQQTGILVDPVYTLAAWEKAMLLSSKEDEEGAEVVMLHTGGTLGMFGLAQRYKKYFGMLKK 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02511 406 PIRSF ACCD_DCysDesulf 12 176 IPR027278 -
Vifa2g02511 406 PIRSF ACCD_DCysDesulf 179 401 IPR027278 -
Vifa2g02511 406 FunFam D-cysteine desulfhydrase 2, mitochondrial 77 178 - -
Vifa2g02511 406 Gene3D - 77 179 IPR036052 -
Vifa2g02511 406 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 60 398 IPR036052 -
Vifa2g02511 406 FunFam D-cysteine desulfhydrase 2 mitochondrial 200 400 - -
Vifa2g02511 406 Gene3D - 188 400 IPR036052 -
Vifa2g02511 406 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATED 13 402 IPR027278 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02511 Vifa-Chr2 662282503 662284507 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02511 K05396 - gmx:100801680 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02511 2 662282503 662284507 Vifa2g02511 2 662282503 662284507 ECH