Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02510 ATGAATCCGTTGTGCTGCATTGCTCCGGTTTCGATCGATCGGGACCGGAGTAACGCCGTGGTGTCGAAATCTAATGCTCAGTGTCAGTTAGGGTTAGATTCGTCGATCAAGACGGTGAACTCTGCTTCTAAATTGAGTATTTCAACTCATGACTCGTCGATCGCTGCGGATTCGGTTAAATCGTCTTCTGCGGGTTTGAATCATGATGATGATGATGTAGTTCATGAGCTTCGGGATTCTAAGGGGTTTGGTGGTGGTGGAAATGGTGGTGGTGTGGCTGGGAGTGTGGCGGGGATACTGTATAAGTGGGTGAATTATGGTAAGGGTTGGAGGTCTAGGTGGTTTGTGTTGGAAGATGGTGTGCTTTCTTATTATAAGATTCATGGACCGGATAAGATCTTGGTGAGTCCGGCTAAAGATAGGAGTGTTAGGGTGATCGGAGAGGAGTCCTCGAAGTATGTGAAAAAGGCAAATTGGAATCTGAATCGAGCTAATGGAGGAGTAGCAGTAGGAGGAGCTACTAAGCAATGCAAGCCCTTTGGCGAGATTCATTTGAAGGTTTCTTCAGTTCGCTTCAGCAAGTCTGATGAAAAGCGGCTTTCTTTATTTACCGGAACAAAAACTCTCCACTTGAGGTGTGTATCTAGAGAAGACAGAGCCATGTGGGTTGAAGCTTTGCAATCTGCAAAAGATCTTTTTCCTAGAGCTCTGACAAGCAGTGATCTTGCTACTCCAGAAGATATTGTGGTTTCGACAGAGAAACTGCGATCAAAGTTATCACAGGAAGGCATAAGTGAAGAAATCATCAATGATTGTGAGTCCATTATGCTCTCTGAAGTCTCATATCTACAAGGCAAATTGAAGTTTCTTCAGCAGAAACATGTTATGTTGTTGGACACCTTAAAACAGTTGGAGACAGAGAAAATAGAGCTGGAAACTACTGTTGTAGATGAAACAAAGGAACGTGAGTCATATTGCGGACAAGGGAATAGAAGGTTTAGTGATTTCTATTCTGTTATGTCGGAAGGCAGTGCTACAGATTCAGTAGCTGATAATGAAAGTCAAGATGGAGCAGATGCTGAAACAGACGATGACGATGGAACATATTTTGATACAAATGAGATTTTATATTCAGATGCCTTAAGAAGTGCTTCCTATCGAAGTAGAGAAAGTGCGGGAAATGGCAGTATATATGATAGAGATTATATTCTCCATGATGGTTTGCATGGGTTTGAGAAGGCGATCAAAGATATAAGCTATCCTTATGTCAAAAGAAGGGATAATTTGCCAGAACCAAAAGAGAAAGAGAAACCTGTTGGCTTGTGGTCAATTATTAAAGACAATATTGGGAAGGATCTTTCTGGAGTTTGTCTCCCTGTTTATTTTAATGAACCACTCTCTTCATTGCAAAAATGTTTTGAAGACCTGGAGTACTCAAACCTAGTTGATAGAGCATGTGAGTGGGGAAAGCAGGGAAATGAATTGATGAGAATTCTAAATATTGCAGCATTTGCTGTGTCTGGCTATGCGTCCACTGAAGGTCGACAGTGTAAACCCTTCAATCCGCTACTTGGGGAGACTTACGAAGCTGACTATCCCGATAAAGGGGTTAAATTTTTTTCTGAGAAGGTTAGTCATCATCCAATGGTTGTTGCTTGTCACTGTGAGGGAAGAGGGTGGAAGTTCTGGGCAGACTCCAATTTAAAAGGAAAGTTCTGGGGGCGTTCTATTCAGTTAGATCCTGTGGGTGTTCTCACCCTTCAGTTTGAGGACGGTGAAACATTTCAGTGGAGCAAGGTCACCACTTCCATATACAATATTATACTCGGTAAAATTTATTGTGACCACTATGGTACTATGCACATCAAGGGCAGCGGAAACTACTCTTGCAAACTGAAGTTTAAAGAGCAATCAATCATTGACCGGAATCCACATCAGGTCCATGGATTTGTTCAAGACAACAGAACTGGAGAGAAGGTAGCAATGTTAATTGGGAAGTGGGACGAAGCAATGTACTATGTACTTGGGGATCCAACTACAAAGCCCAAAGGTTATGATCCAATGACGGAAGCTGCATTATTGTGGGAAAGGGACGACTATGTCCCCAAGACGAGATATAACCTTTCTCCCTTTGCAATTTCCTTGAATGAAATAACGCCCAGTTTATTGGAGAAATTGCCTCCAACTGACTCAAGGTTGAGACCTGATCAGAGACATTTAGAAAATGGAGACTATGAATTTGCAAATGCAGAGAAACTAAGGCTTGAACAGTCGCAGAGACAGGCAAGAAAGATGCAGGAAAGAGGATGGCAGCCGAGATGGTTTAAGAAGGATGAGGATGGTTCTTACCGATACATGGGTGGTTATTGGGAGGCAAGAGAAAAGAACAATTGGGATGAAATCCCTAATATATTTGGACAAGGTTGTGATTTGCCTTTGTGTTCTGAAGAGACTGTATCCTACTGA 2466 0.4234 MNPLCCIAPVSIDRDRSNAVVSKSNAQCQLGLDSSIKTVNSASKLSISTHDSSIAADSVKSSSAGLNHDDDDVVHELRDSKGFGGGGNGGGVAGSVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILVSPAKDRSVRVIGEESSKYVKKANWNLNRANGGVAVGGATKQCKPFGEIHLKVSSVRFSKSDEKRLSLFTGTKTLHLRCVSREDRAMWVEALQSAKDLFPRALTSSDLATPEDIVVSTEKLRSKLSQEGISEEIINDCESIMLSEVSYLQGKLKFLQQKHVMLLDTLKQLETEKIELETTVVDETKERESYCGQGNRRFSDFYSVMSEGSATDSVADNESQDGADAETDDDDGTYFDTNEILYSDALRSASYRSRESAGNGSIYDRDYILHDGLHGFEKAIKDISYPYVKRRDNLPEPKEKEKPVGLWSIIKDNIGKDLSGVCLPVYFNEPLSSLQKCFEDLEYSNLVDRACEWGKQGNELMRILNIAAFAVSGYASTEGRQCKPFNPLLGETYEADYPDKGVKFFSEKVSHHPMVVACHCEGRGWKFWADSNLKGKFWGRSIQLDPVGVLTLQFEDGETFQWSKVTTSIYNIILGKIYCDHYGTMHIKGSGNYSCKLKFKEQSIIDRNPHQVHGFVQDNRTGEKVAMLIGKWDEAMYYVLGDPTTKPKGYDPMTEAALLWERDDYVPKTRYNLSPFAISLNEITPSLLEKLPPTDSRLRPDQRHLENGDYEFANAEKLRLEQSQRQARKMQERGWQPRWFKKDEDGSYRYMGGYWEAREKNNWDEIPNIFGQGCDLPLCSEETVSY 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02510 821 Pfam Oxysterol-binding protein 441 794 IPR000648 GO:0008289
Vifa2g02510 821 MobiDBLite consensus disorder prediction 344 368 - -
Vifa2g02510 821 FunFam Oxysterol-binding protein-related protein 2A 737 807 - -
Vifa2g02510 821 Coils Coil 748 768 - -
Vifa2g02510 821 ProSiteProfiles PH domain profile. 93 231 IPR001849 -
Vifa2g02510 821 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 96 793 IPR000648 GO:0008289
Vifa2g02510 821 Coils Coil 287 321 - -
Vifa2g02510 821 Gene3D - 737 803 - -
Vifa2g02510 821 FunFam oxysterol-binding protein-related protein 1D isoform X1 526 699 - -
Vifa2g02510 821 Pfam Pleckstrin homology domain 98 228 - -
Vifa2g02510 821 Gene3D - 93 233 IPR011993 -
Vifa2g02510 821 SMART PH_update 94 233 IPR001849 -
Vifa2g02510 821 SUPERFAMILY PH domain-like 96 231 - -
Vifa2g02510 821 Gene3D - 526 692 - -
Vifa2g02510 821 MobiDBLite consensus disorder prediction 354 368 - -
Vifa2g02510 821 SUPERFAMILY Oxysterol-binding protein-like 435 807 IPR037239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02510 Vifa-Chr2 661939143 661946582 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02510 K20456 - gmx:100817856 1469.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02510 2 661939143 661946582 Vifa2g02510 2 661939143 661946582 ECH