Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02503 ATGGCAGCAACAATGGCAATGATGATCAACTCCAAGTGTCTAAACACAGCCATACCAAAGTTGCAAAACCCAGCAACTAGCACTACTAGAGTAACAACATGCAAAACCACCACCGTTCAGAACCTACCAAAGGCTCTTACCTCTATTGACACCAACGTTGTGTCACCTTCCATTGCAATTGCAGGGGCAATATTTTCTTCCCTCGCAACCTGTGATGCTGCTTTCGCCGCTCAACAAATAGCAGAAATAGCAGAAGGTGATAACAGAGGATTAGCACTGTTGTTGCCATTGGTTCCAGCTATAGGGTGGGTTTTGTACAACATATTGCAACCAGCTTTGAACCAAATCAACCGTATGCGTAGCACGAGGGGAGTGATTGTTGGGCTTGGACTCGGGCTTGGTGGGCTTGCGGTATCGGGTATGCTGTCAGAAGCATCTGCTAGTGAGATAGGTATGATCGCTGAGGCTGCTCGAAGTGACAACAGGGGAACACTTCTGCTGTTTGTGGTTGCACCAGCTATACTTTGGGTGCTTTACAATATTTTGCAGCCTGCTCTTAACCAGATCAATAAGATGAGATCTGAGTAA 588 0.4643 MAATMAMMINSKCLNTAIPKLQNPATSTTRVTTCKTTTVQNLPKALTSIDTNVVSPSIAIAGAIFSSLATCDAAFAAQQIAEIAEGDNRGLALLLPLVPAIGWVLYNILQPALNQINRMRSTRGVIVGLGLGLGGLAVSGMLSEASASEIGMIAEAARSDNRGTLLLFVVAPAILWVLYNILQPALNQINKMRSE 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02503 195 Hamap Photosystem II protein Y [psbY]. 87 121 IPR009388 GO:0009523|GO:0015979|GO:0016020|GO:0030145
Vifa2g02503 195 PANTHER PHOTOSYSTEM II CORE COMPLEX PROTEINS PSBY, CHLOROPLASTIC 1 194 IPR038760 GO:0009523
Vifa2g02503 195 Pfam Photosystem II protein Y (PsbY) 87 119 IPR009388 GO:0009523|GO:0015979|GO:0016020|GO:0030145
Vifa2g02503 195 Pfam Photosystem II protein Y (PsbY) 160 192 IPR009388 GO:0009523|GO:0015979|GO:0016020|GO:0030145
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02503 Vifa-Chr2 656711249 656711836 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02503 K02723 - zju:107428525 215.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02503 2 656711249 656711836 Vifa2g02503 2 656711249 656711836 ECH
Vifa2g02503 2 656711249 656711836 Vifa2g02503 2 656711249 656711836 PCT