Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02497 ATGTCTGAGAATAATCACGTAGCAGAGCAAGATTCGGATTCGGATCCTCATTTGGGAACCCAATCAAATGGGGAAACGGAATCAACAATTGATCAGGTAACCCATGTTGATCACCAAGATGAAGTTTCGGAAGAACCCGAAGATGGGAAATCCACAGATACTGCCAAAGATGACATGTTTGAAGATTGCCCTGACGAGCTAATTTTGCTCGATGGTAGGATTAAGGAAGAAGAAGCTGTAGCTACTGAAAATGAAGATGGAAAGGAAGAGGGAAGTCGAATTCTTGAATTTGACAATGGCGTAGCGGGGGAGCTGGAGCAGCTGCGTATTAAGTTGGAGAATGCTGTTGCTGAGAAAGAAAGTGTCGTGGAGGAATTCCAGGAACTTTTATCTGCGAGGGACTTTGAGATTGAGAATCTAAATGCGAAGGTTTCTGAATTAGTGCTATCCAATGAGAGCTTGCAAGTTTCGTTACAAGCTCAGCTTGAAAAAGATGGTGATATTGATAATGTGGTGGATAGGATGATATCCTCTCTTGCAACTGTTGTTAATCGAGAGCAAGTATTGGATTATTCTAGAAGTGGGAAAATAGTTTATATCGAGGAAAGTACTGCACATTTGATTCAAAAGTATAATCAGTTTCTTTCTGAAATTTATCAACTTGGGCAGTCGTTTTCTGAGGTTGGATTGGGTTCTATAGCGAATGAATATGGGAACATACTTGTTGATGCTCGAGGTGGGTTGCTAGAGCTCAAGAGAAAGGAAGAAGAATTGGTTCAAAAACTTTCTTATTTAGAAGATGAAAATCATAAGCTGGTTGAAGAGCTTGACAAGGAAAAGGTGATAATAGGGAAATTGAATACTGAGCTTGGAAATGTAAAAGTAGAACTAGAGCAGGAAAAGGTTAAATGTGCTAATACCAAAGAGAAGCTTAGTATGGCTGTGACAAAAGGAAAGGCTTTGGTACAGCAGCGAGATTTACTAAAGTCATCTCTGGCCGATAAGTCCAGTGAGCTTGAGAAATGTTTAATTGAATTGCAGGAGAAATCAGCTTCACTAGAAGTTGCTGAACTTACTAAACAAGAGTTGGGCCGGAGTGAAAATATGGTTGCATCCCTGAATAATTCATTACAGCAAAATCATACAATTTTTGAGCAAGTAGAAGAAATCTTGTCTCATGCCAAACTTGATCAGCCTGAAATGCTTGATTTGCCAGAGACACTAAGATGGCTTGTGGATGACAGAAATAAACTCAAGGGTGCCTTCTTGGAACTACGCAAATTGAAGGATTCTCTATCTCTATTAGACCTACCAGAGTCTGTTTCATCATCTGATCTGGAATCACAAATGAAATGGCTTATAGATTCTTTTCATAAGGCCCACAATGATATTTATGTTCTACAGGAAGAAGTTTCTACAATCAAGGAAGCATCCATAAATCATATTGATCAGATGAGTATTTCACTTTTGGTGGACTCACAGGAAAAAGATTACCTTCAGGCTGAATTAGCAGATTTGAGGTTTGAATATGGAGAGCTTGTTGGCAAGAACCATCAGATTTCTTTGGAGAAGGATCAGATAGTGAAAATGTTAATTGATTTTTCCGGTCTAAACATGAATGATGAAGGAATTGATCAATTCTCTTCCACCACTTTGATGATTATTGACTTATGTTTTCAAAAATTGAAAGGACAGAGTGGTTCCCTCTCCAAAGCATCTCATATTGATTCTGCATTGTTTGAAAAGATTCAAAGTCTCCTGTATGTCAGGGATCAGAGCTTAATGCTGTACGAAGACATACTTGAAGAAGATTTTCTAATTAGATCTGATGTGAATAAGCTGTCAAATGAGTTAAAAGTGGTATCTGATGAACTTATAGCACTGAAAGAAGAAAGGAGTTCTCTTCTGAAAGATCTTGAACGATCAGAGAAAATTCAAAGTCTCCTGTATGTCAGGGATCAAAGCTTAACGCTGTATGAAGACATACTTGAAGAAGACTTGCTAGTTAGATCTGATGTGAATAAGTTGTCAGATGAGTTAAAAGTGGTATCTGAGGAAGTTATAGCACTGAAAGAAGAAAGGAATTCTCTGCTGAAAGATCTTGGACGATCAGAGGAAAAGACTGGCATGCTTAGGGACAAGTTGTCCATGGCAGTTAAGAAAGGAAAGGGATTAGTTCAAGATAGGGACAATCTAAAAGGTCTTATAAATGAAAAGAACTCAGAGATTGAGCAGTTGAAGGTTGATTTGCAGAAGCATGAATCTGCAGTTTCTGAATACAAGGATGAGATCAAGAGATTGTCCAATGATTTGGAAAGCATTCCTAAACTAGAGACTGATCTTCTGGAAATAAAAAAGGAAAGGAATCAGTTTGAACAGTTTTTGATGGAGAGCAATAACATGTTGCAGAGAGTGATGGAATGCATTGATGGTATCGTTCTTCCAGACGATTCAGTTTTTGGTGAACCTATAGATAAGGTGAAGTGGCTCGCTGGTTTTGTCAATGATTGCCAAGATGCTAAGGTGCATGTAGAGCAACAGTTGCAGTTAGTTAAGGAGGAAGCCGGTATACTTGAAGTTAAATTGGCAGAAGCCCAAGAAACTGTAAACTCCCTTGAGCAAAGATTATCTTCTTCAGAGGATACTGTTTCTCAACTTGCTGAAGAAAAGACAGAGTTAGAACGCGAGGGAGAAAAAGTTGTGGAAGAGTTACAGAATGTTAAAGAAAAAGTTGCTGAAGCTTGCAGTACTAATAAGCTTCTTGAAGACGCCTTATCACATGCAGAAAAAGATATTTCTGTGCTTTCTGAAGAGAAAGAGCAGGCTCAAGTATCTAGAGTTGCTGCAGAGACAGAGTTAGAGAGATTTAGAGACGAAGCAGTCAGGAAGACAGGTGAACTAGCAGAAGCCAGCAGAACCATAAAGGATCTAGAAGTTGAACTATCTCAGGTTGAGAGTAAGTTCAATTTATTGACTGAAAAAAATAATGCTGATCAAGTTGTCAAGACTGACTTGGAAAATGAATTGAAGAAGCTGCAAGATGAAGCAGAAATTTATGCTAGCCATTCAGTTGGTTCCTCTGCAACTATAACATCACTGGAAGATGAATTGTTGAAGGCTCGAAATGGTATTTCTACCCTAGAAAATGCAAATGAAATCGCCAAACAAGAAATATCTTCGCTCAGTTCAAAGTTAAGTTCATACATGCTTGACTTATCAGGAAAGAATGGCCACTTAAGTATCAAATCCCTAGCGCTTCTTAATTCCTTTAATTATCTTCTGGCGCATATTAGAGACGATACTCTATTTCTCAAGATAAAACAATGCTTTGAGAGGAAATGTGAGACCTTGGAGAAAGTGGATCTCACTGTGAACAAAGTAAATAACTATCTTACCCTGGCTGCTAAAGATTCTGAAGGGCACCTTGAGATGGAGGAAGATCCACCCGTAAGAAAATCATTTGCGGCCAACCTTGAAATTTTTGAAGTTGAAATGGACAAAGCAGAGACTATTACTATTGAATCAATAATCTCATCAATTGGAAAAATTGGAGAAGAATTATCGTTGAGAAGCAAACATATTGCAGATAAGTTTGATGAATTTTCGGATTCTGTTGATGAATTTCTTTCTCCTCTCCCTGGAAAACTACTGGAAACCGAGTCAAATATAATAGCTATTGTTGAGCACATGAAAATTATGAAAGAAGAGGCAAATAGTGTGGCAAATTTGAAAGAAGAAAAGGATAATATTATCGCCAATTTAGAGAATGATATCAGTTTATTGCTGTCGTCATGCATTGATTCTACCAATGAACTTCAGAATGGAGTTCACCAAAATCTTGGGCAACTTGGCTCCACTTTTGAGGTCGAGAAGTTCAACCATGAAGCTGATGAACAAGTAGAACATCACAGAGACAGTAAATATGCAGACGCATCAAGAAAGTTGATAAATGCTTCTGGAAAAGTTCAAACTTTGATTAGACAGTTCAAATATAAAAGTGAGCAAGTAGATACAACAGTTAGAGATTTGCAGGCCAAATTGAATGAAACGTCAGTTGCTTTTGAATTGGCTACAGAGGAGAAAGACTTCAATAAGAACAGAGTTTTGCAGTTGGAGTCTGATATTCAATCACTCGAAATTGCTTGCAGTGAGCTTAAGGATAAGGTAGAGGGTTATCACGTCCTAGAAGAAAAATTAAAGGAAAAAGAGGAAGAGATTTCATCAATGCACAGTGCTTTGATGGCAAAAGAAGAAGAAAGCTCCATCCTCTCAGCATCTCAGTTAAGAGATATCTTTGACAAGATAGATAGGATCGATATCTCGATTGTAGAATCTGAAGACGATTTGGAGCTACATACTTCAGACCCTGTGAAGAAGCTCTCTTATATTATTGATAGTGTTACTAGGTTGCATCATGAAATAAATTCTCTGTCTCATGATAAAAAAGAGATGCAAGCAATCCTTGACACCAAGGTTCTTGAAATTAATGATTTAAAGGAGGAAGTCAAACAACTCAATAGACACTGTGAAGACTCAAAAATGGTCAAAAGCGAACTTTTTGAACTAACCTCTGTCTTGGAAAAAATTATAGATATTTTGGGAGCCAACGGCTGGGTTGTAGATAGAAAATCTAAAGATGTTAGAGAAGTATTGCCAGCATTGGAAAAGCATATCATTGCCATTCTTTTTGAATCTGAAAATTCAAAATCTAAGGTCCAGGAACTTGGTACTAAATTAGTTGGAAGTCAGAAGGTTATTGATGAATTAACAACCAAGGTTAAGTTACTTGAAGATTCAGTTCAAGATAGGAATTCTCAGCCAGAAATTGTCCAGGAAAGGAACATATATGAAGCACCCATATTACCTGCTAGCTCCGAGATAACTGAAGTTGAAGAGGGATCTCGTGGCAAAAAAACATTATCTCCTGTCCCATCGGCTGCTCACGTGCGAAGTATGCGAAAAGGATCTACTGACCATCTTGCACTTGATATTAGTATGGAGTCTGATCATTTAATCAACAGTACTGATACCAATGATGATAAAGGTCATGTATTCAAGTCTCTGAACACTTCTGGATTCGTACCGAAACAAGGAAAGCTCATTGCAGATCGTATTGACGGAATATGGGTATCTGGTAGCGGTGTTCTCATGAGTCGCCCGAGAGCAAGATTAGGACTCATCGGCTATCTGCTACTCATGCATATATGGCTACTGGGGACAGTATTGTAG 5229 0.3817 MSENNHVAEQDSDSDPHLGTQSNGETESTIDQVTHVDHQDEVSEEPEDGKSTDTAKDDMFEDCPDELILLDGRIKEEEAVATENEDGKEEGSRILEFDNGVAGELEQLRIKLENAVAEKESVVEEFQELLSARDFEIENLNAKVSELVLSNESLQVSLQAQLEKDGDIDNVVDRMISSLATVVNREQVLDYSRSGKIVYIEESTAHLIQKYNQFLSEIYQLGQSFSEVGLGSIANEYGNILVDARGGLLELKRKEEELVQKLSYLEDENHKLVEELDKEKVIIGKLNTELGNVKVELEQEKVKCANTKEKLSMAVTKGKALVQQRDLLKSSLADKSSELEKCLIELQEKSASLEVAELTKQELGRSENMVASLNNSLQQNHTIFEQVEEILSHAKLDQPEMLDLPETLRWLVDDRNKLKGAFLELRKLKDSLSLLDLPESVSSSDLESQMKWLIDSFHKAHNDIYVLQEEVSTIKEASINHIDQMSISLLVDSQEKDYLQAELADLRFEYGELVGKNHQISLEKDQIVKMLIDFSGLNMNDEGIDQFSSTTLMIIDLCFQKLKGQSGSLSKASHIDSALFEKIQSLLYVRDQSLMLYEDILEEDFLIRSDVNKLSNELKVVSDELIALKEERSSLLKDLERSEKIQSLLYVRDQSLTLYEDILEEDLLVRSDVNKLSDELKVVSEEVIALKEERNSLLKDLGRSEEKTGMLRDKLSMAVKKGKGLVQDRDNLKGLINEKNSEIEQLKVDLQKHESAVSEYKDEIKRLSNDLESIPKLETDLLEIKKERNQFEQFLMESNNMLQRVMECIDGIVLPDDSVFGEPIDKVKWLAGFVNDCQDAKVHVEQQLQLVKEEAGILEVKLAEAQETVNSLEQRLSSSEDTVSQLAEEKTELEREGEKVVEELQNVKEKVAEACSTNKLLEDALSHAEKDISVLSEEKEQAQVSRVAAETELERFRDEAVRKTGELAEASRTIKDLEVELSQVESKFNLLTEKNNADQVVKTDLENELKKLQDEAEIYASHSVGSSATITSLEDELLKARNGISTLENANEIAKQEISSLSSKLSSYMLDLSGKNGHLSIKSLALLNSFNYLLAHIRDDTLFLKIKQCFERKCETLEKVDLTVNKVNNYLTLAAKDSEGHLEMEEDPPVRKSFAANLEIFEVEMDKAETITIESIISSIGKIGEELSLRSKHIADKFDEFSDSVDEFLSPLPGKLLETESNIIAIVEHMKIMKEEANSVANLKEEKDNIIANLENDISLLLSSCIDSTNELQNGVHQNLGQLGSTFEVEKFNHEADEQVEHHRDSKYADASRKLINASGKVQTLIRQFKYKSEQVDTTVRDLQAKLNETSVAFELATEEKDFNKNRVLQLESDIQSLEIACSELKDKVEGYHVLEEKLKEKEEEISSMHSALMAKEEESSILSASQLRDIFDKIDRIDISIVESEDDLELHTSDPVKKLSYIIDSVTRLHHEINSLSHDKKEMQAILDTKVLEINDLKEEVKQLNRHCEDSKMVKSELFELTSVLEKIIDILGANGWVVDRKSKDVREVLPALEKHIIAILFESENSKSKVQELGTKLVGSQKVIDELTTKVKLLEDSVQDRNSQPEIVQERNIYEAPILPASSEITEVEEGSRGKKTLSPVPSAAHVRSMRKGSTDHLALDISMESDHLINSTDTNDDKGHVFKSLNTSGFVPKQGKLIADRIDGIWVSGSGVLMSRPRARLGLIGYLLLMHIWLLGTVL 1742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02497 1742 Coils Coil 834 1022 - -
Vifa2g02497 1742 MobiDBLite consensus disorder prediction 31 63 - -
Vifa2g02497 1742 Coils Coil 611 645 - -
Vifa2g02497 1742 Coils Coil 1340 1360 - -
Vifa2g02497 1742 Coils Coil 1030 1064 - -
Vifa2g02497 1742 MobiDBLite consensus disorder prediction 14 30 - -
Vifa2g02497 1742 SUPERFAMILY Tropomyosin 835 1068 - -
Vifa2g02497 1742 Coils Coil 673 707 - -
Vifa2g02497 1742 Coils Coil 1233 1253 - -
Vifa2g02497 1742 MobiDBLite consensus disorder prediction 1 63 - -
Vifa2g02497 1742 Coils Coil 729 770 - -
Vifa2g02497 1742 Coils Coil 1368 1419 - -
Vifa2g02497 1742 PANTHER CILIA AND FLAGELLA-ASSOCIATED PROTEIN 58-RELATED 217 1726 - -
Vifa2g02497 1742 Coils Coil 1586 1606 - -
Vifa2g02497 1742 Coils Coil 105 132 - -
Vifa2g02497 1742 Coils Coil 248 275 - -
Vifa2g02497 1742 Coils Coil 1481 1515 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02497 - - gmx:100800411 1976.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02497 2 656252986 656259545 Vifa2g02497 2 656252986 656259545 ECH