Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02489 ATGTTCAAAAAGGTTTTCAGTAAAATCCCTAAAAAGTCCTCAAAAGGCTCTGACAATCGTGACCAAGGTGGAAACTCTAGAAGCCATGGTGTTGTAGCATCAAAAAACACTGATAATGTTACCCCATCAGGTAGTAGCAAAACCGGTAATGTTTCTTCTTCTTCTTCCTCTTCCTTAGGACAAGGACAGTATCATAATAATCATGGTAATAAATCTTCGTTACCTATAAACGAGAATTCCAATGGAAATTTCAATTCCTATGAAGCATTGCCTGCGTTTAGAGATGTTCACAATTCTGAGAAACCGAGTTTGTTTATAAAGAAGCTTAGGATGTGTAGTGTTGTTTTTGACTTCACTGACCCTACTAAACACCTCAAGGAAAAAGAGGTTAAAAGACAGACTTTGGTGGAGCTTGTTGATTATGTTTCTTCTGTTAATGCTAAGTTTACTGAGAATGTTATGCAAGAGGTTGTGAAGATGGTGTCTGTAAATATATTCAGAACACTTAGTCCTCAGCCGCGTGAGAATAAGCTTATTGATGGGGTTGAATTGGAGGAGGAGGAGCCTTCGATGGATCCTTCTTGGCCTCATTTGCAGATTGTGTATGAGCTTTTTCTTAGGTTTGTTGCATCGCCTGAGCTGGATGCGAAGTTGGCTAAGAGGTTTATTGATCAGTCTTTTATTCTGAGGCTGCTTGATTTGTTTGACTCCGAGGATCCTAGAGAGAGGGAGTATTTGAAAATGTCCTTGCATCGGATTTACGGCAAGTTAATGGCGCATCGTCCTTTCATTAGGAAATCAATTAATAACACCTTTTTGAATTTTGTTTTTGAGACGGAGAAGCATAATGGGATTGCCGAGTTCTTGGAAATTCTAGGGAGTATCATTAATGGTTTTGCGTTGCCTTTGAAAGAAGAGCATAAATTGTTTCTGGTTCGGATATTGATTCCGTTGCACAAACCAAAGTGCTTAGCAATGTATCATCAGCAGTTATCTTATTGCGTTACTCAGTTTGTGGAGAAAGATTGCAAGCTTGCTGATACAATCATTAGGGGCTTATTGAAGTACTGGCCAATAACAAATAGCTCAAAAGAAGTTATGTTCCTAGGTGAGTTGGAAGAAGTCTTGGAAGCAACACAACCTCCGGAATTCCAGCGATGTATGGTGCTGTTGTTTCGCCGTGTTGCTCATTGTTTGAATAGCCCCCATTTTCAGGTGGCAGAAAGAGCTCTGTTCTTGTGGAATAATGATCACATTGTGAACTTAATCAAACAAAACTGCAAAGTGATACTTCCCATCATCTTTCCTGCATTAGAGAAAAATACTAAAACTCATTGGAATCAAGCTGTCCACAGTTTGACTTTAAATGTTCAGAAGATTTTTCAGGATCTCGATCCTGATCTGTACAAAGAATGCTTACAAAAGTTTGAGCAAGACTCGTCAAAGGAAGGTGAAGTGACAGCAGGACGCGAAGCCACGTGGAAACGTTTGGAAGAGGTTGCCGCGAAGAAAGCTGCAGCTAATGAAGCTGTGCTTATTAGTAAAACGCTCCCCCGCAAATCTGCCGGTTAG 1572 0.4014 MFKKVFSKIPKKSSKGSDNRDQGGNSRSHGVVASKNTDNVTPSGSSKTGNVSSSSSSSLGQGQYHNNHGNKSSLPINENSNGNFNSYEALPAFRDVHNSEKPSLFIKKLRMCSVVFDFTDPTKHLKEKEVKRQTLVELVDYVSSVNAKFTENVMQEVVKMVSVNIFRTLSPQPRENKLIDGVELEEEEPSMDPSWPHLQIVYELFLRFVASPELDAKLAKRFIDQSFILRLLDLFDSEDPREREYLKMSLHRIYGKLMAHRPFIRKSINNTFLNFVFETEKHNGIAEFLEILGSIINGFALPLKEEHKLFLVRILIPLHKPKCLAMYHQQLSYCVTQFVEKDCKLADTIIRGLLKYWPITNSSKEVMFLGELEEVLEATQPPEFQRCMVLLFRRVAHCLNSPHFQVAERALFLWNNDHIVNLIKQNCKVILPIIFPALEKNTKTHWNQAVHSLTLNVQKIFQDLDPDLYKECLQKFEQDSSKEGEVTAGREATWKRLEEVAAKKAAANEAVLISKTLPRKSAG 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02489 523 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 90 501 IPR002554 GO:0000159|GO:0007165|GO:0019888
Vifa2g02489 523 MobiDBLite consensus disorder prediction 1 80 - -
Vifa2g02489 523 Gene3D - 98 500 IPR011989 -
Vifa2g02489 523 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 508 IPR002554 GO:0000159|GO:0007165|GO:0019888
Vifa2g02489 523 FunFam Serine/threonine protein phosphatase 2A regulatory subunit 97 500 - -
Vifa2g02489 523 SUPERFAMILY ARM repeat 102 483 IPR016024 -
Vifa2g02489 523 PIRSF PP2A_B56 1 522 IPR002554 GO:0000159|GO:0007165|GO:0019888
Vifa2g02489 523 MobiDBLite consensus disorder prediction 19 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02489 Vifa-Chr2 653997429 654002166 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02489 K11584 - gmx:100811438 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02489 2 653997429 654002166 Vifa2g02489 2 653997429 654002166 ECH