Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02479 ATGGGTGTAGGTGATGAAAAAGGACACCATGAAGAAAATTGCAACATCGACTCCAAACAAAAAGCTATTAATGATTGGCTTCCTGTAACTGCTTCTAGAAATGCCAAATGGTGGTATTCAACTTTTCACAATCTAACAGCCATGGTTGGTGCTGGTGTTCTAAGTCTTCCATATGCTATGTCTAATATGGGCTGGGGACCCGGAGTTGCCATTCTTATCTTGTCATGGGTGATTACATTGTACACGTTATGGCAAATGGTTGAGATGCATGAAATGATACCTGGAAAAAGACTTGACAGGTATCATGAATTGGGTCAAGAAGCCTTTGGAGAGAAGTTGGGTCTTTGGATTGTGGTTCCACAACAAGTTATTGTTGAAGCTGGCACGTGTATTGTGTACATGGTCACTGGTGGTAAATCATTGAAGAAAATTCATGACACTCTTTGTCCTGATTGTAGAGATATCAAAACCTCATATTGGATTATTATTTTTGCTTCACTCAACTTTGTTATTGCTCAATGCCCCAACTTCAACTCCCTTTCTATTATATCTATGACCGCAGCAGCTATGTCTTTGACATACTCAACCATAGCATGGTCAGCTTCAGTTAAAAATGGGATTGTCTCAAATGTTGACTATGGACCAAGATCAACTTCAACTGTTGATTCTGTATTCCACTTCTTTTCTGCATTGGGAGATGTAGCATTTGCTTATGCAGGTCACAATGTGGTTCTAGAAATCCAAGCAACTATGCCCTCGACCCATGAAGTACCTTCCAAGAAACCCATGTGGAAAGGAGTTATTTGGGCATATCTAGGAGTTGCATTTTGCTACTTCCCAGTTGCAATCATTGGATACTATATGTTTGGTAACTCTGTTGACGACAACATCCTCATCACACTAGAAAAACCTGTTTGGCTCATTGCTGCTGCTAACTTGTTTGTAGTTATCCATGTTATCGGTGGTTATCAGGTATTTGCAATGCCGGTGTTTGACATGATTGAGACTGTCATGGTTAAGAAATTACATTTCCCACCTACTTTTGCACTCCGATTTTCAGTTCGCAGTATATATGTTGCATTGACTATGTTCATAGGTATATGCATCCCATTCTTCGGTTCACTTCTTGGGTTTTTAGGAGGATTTGCATTTGCCCCAACAACTTACTTTTTGCCTTGTATCATCTGGCTTAAACTCAAGAAACCTAAGAAATTTGGCTTGTCTTGGACAATTAATATGATATGCATTGTCATTGGAGTCTTATTAATGATACTATCCTCAATTGGTGCTATGAGGAATATCATTGTGCAATCCGAGCACTACAAGTTCTTCTCATAA 1338 0.3931 MGVGDEKGHHEENCNIDSKQKAINDWLPVTASRNAKWWYSTFHNLTAMVGAGVLSLPYAMSNMGWGPGVAILILSWVITLYTLWQMVEMHEMIPGKRLDRYHELGQEAFGEKLGLWIVVPQQVIVEAGTCIVYMVTGGKSLKKIHDTLCPDCRDIKTSYWIIIFASLNFVIAQCPNFNSLSIISMTAAAMSLTYSTIAWSASVKNGIVSNVDYGPRSTSTVDSVFHFFSALGDVAFAYAGHNVVLEIQATMPSTHEVPSKKPMWKGVIWAYLGVAFCYFPVAIIGYYMFGNSVDDNILITLEKPVWLIAAANLFVVIHVIGGYQVFAMPVFDMIETVMVKKLHFPPTFALRFSVRSIYVALTMFIGICIPFFGSLLGFLGGFAFAPTTYFLPCIIWLKLKKPKKFGLSWTINMICIVIGVLLMILSSIGAMRNIIVQSEHYKFFS 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02479 445 Gene3D Amino acid/polyamine transporter I 30 439 - -
Vifa2g02479 445 Pfam Transmembrane amino acid transporter protein 34 430 IPR013057 -
Vifa2g02479 445 PANTHER OS05G0424000 PROTEIN-RELATED 35 430 - -
Vifa2g02479 445 FunFam Lysine histidine transporter 1 30 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02479 Vifa-Chr2 650370823 650373012 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02479 18 445 Organic Solute Cotransporters AT1G24400 73.832 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02479 K26385 - gmx:100786115 745.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02479 2 650370823 650373012 Vifa2g02479 2 650370823 650373012 ECH