Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02475 ATGCCGCCTTCCCCAGCGATGAGATACTCTCCGGGGAGAGAGACTAGAGAAAGAGATAGTTTTTTGCTTCAATCTTCAGATGACTTGGAAGATTCGTTCGCTACGAGGTTGAGACATTTATCCGATGTCAATGTTGGAATCTCCATTCCTGGTCGGCGAGGAACTAGTGACTTGCTTAATATAGATGGCGACAAGAATGACTATAACTGGTTATTGACGCCCCCGGATACGCCACTGTTTCCTTCGATGGACGAAGATCCACCATTTGCTAATGTAGCAAGCAGAGGAAGGCCTAGTAAACCCATTTCTATATCAAGATCTTCTACGATGGAGAAAAGTCGCAGAAGCAGTAGGGGCAGTGCAAGTCCAAATCGTTTAAGTCCATCTCCTCGTTCGGGAACTAATACATCACAAGCAGGAGGAAGGCCTTCATCATTGCCAAATTACAGTCCAACGTCCTCAAGTTTACGGTATGCTACTCCTACAAGAAGATCATCTCCACCTCCGAATAAGCCCATTACACCTGCTTCCAGGTCTTCCACTTTTACTCCGCGAAGGTTGAGCACTGGTTCCAGTGGCTCTATTGTCTCATCTGGAGTTAGGGTAAATTCCCCGGTTAAGACAACTCGTGGAAACTCTTCATCACCAAAGATAAGAGCATGGCAAACTAATATACCCGGCTTCTCTTCTGAAGCTCCTCCCAATCTCCGTACTTCGTTGGCTGATCGACCAGCAACATATGTGAGGGGTTCATCTCCCGCATCCAGAAATGGTAGGGAATCCAGTGGTAGGGAATCCACACCCAAATTCAGCAGGCAATCAATGTCTCCAACTGCTTCTAGAAGCAGTAGCTCTATTCAGAGTCATGATCGAGACCCATTCAGTTCACGCAGCAAAGGTTCTGTTGCATCATCTGGCGATGATGATCTCGACTCTCTTCCCTCCATCCCAGTCGGTAGCTTAGACAGATTGAGTTCAAGAAGAGATGGTTCGTTTTCAACCAACAGAACTCCTGCCATTTCCAAGAAATCACCCAGGATGATGTCCCCGAATTCTGCTCCTAAAAAATCATTCGACTCTGCTTTCCGTCAAATGGATAGGAAAAGCCCTCAAAACATGTTCAGGCCTCTTTTATCAAGTGTTCCTAGTACAACCCTTTATGCTGGAAATGCAAATTCTGCACATCGATCCCTTGTGTCTAGAAACTCCTCCATTGCAACAAGCAGCAATGCAACCTCTGACCGAGTAACAATTTTTGCTCAAGATACCGAAGGGATTGACCATAGTCAAGATGATATGGCAAGTGAAACTGATAAGACGTTATATTCTGATTTGCATGAAGAAGTGTTTGCCTTTGATAAGATTGATGGACTAGATGCCAATATTGAACATGAAATCAACAAGGAATCAGTTGATCTCCTGCAAAATCAAAACAAAGGCACCAATACTGTTTTTGGTCCAACTGATGCTGAAGGCAATGAAAGTTCAGAAACTTCACATGTCAGAGATGTCATTTCTGAAACTGGTAGTTTTGAAAACACAGCAATCTGTTCTCAATGTGGTTGTTGTTATCAAGTCATTAGTCAAACTGAGGAGAATATTGAGCTTTGTCTACAATGCAGCAGGAAAACCATATTGTTGAGAGCAAACCTCCCTGAGACAGTGTTGGCTGTATCTGAAGGTTCTTCAGCGATTTCTACAAACATGCCCAAAGAAGAAGAAAGTTCATCGGTTGAAACAAGCCAACTAAGGACTGCATCTGAACTTTCTCAATCTCCCTTTGGCGAACATGGTTATGACGAAAGTCAAACTTCATGCAGCGAACTAAACCGGGTTCGCTCACAAAACAGTTCAAATCCAAGTTCACTGAGGGAGGGAGGTGAGCATATGCCTACAAACTGGCTAGAGACGAACCAATCAGGAGTTGATTACAAGAAACGCAACGATGAAATTGGGGATCAGATGTTGGATCACTACAGTGATCGCCCAGATATGGACATGGACCTCATGGAAGGCACCGGCATTTCTGTATTGCTGAAAAGGTCCAGCAGCAACAAAGGACCTATTGTTCGGGCAAGGACTTTTACTGCCACAACTATATCTTATGATGACCTGTCTCTGTCAAGAGACAGTTTAAACAGTATAAGAAGCTCGACAAGACCTGGCAGTTATTCTGCATCATCCTCAACTGATTTTAGCTCTACTAAACAAACAGAGTTTCGTATGCACAGGCAGTTGAGTGGCCGGAAATTGGACGCGGACTGCGGACATGACTTAAGGATTAAGCCTCCGAGCACCGCCGGTTCATCTTTCTCTATACCTTCAAACCATTCTCACCATGAAGTGGGTCTTCCAAATCGAGAAACTTCCGGCAACACAGAATGTAGCCCTGTGGAGGAGATACCTCAAGTTCTGCATGAATATCAAGCTTTAGAAAATACAACGACAGATTTAATTCAGGCTTCTCCTATCGATTCAACTTTTGTTGAGGAAGAAAAACTAGAAAATGATGATAGTAGTAGAGGAAATAATGCTTGCAGCTCAGAACTTTTAAGCCACACAGCTGGTGTTGGACCTGATGACAATATAGTGACATCATTTCCAGATCCCGGGGGTTGTATTTCATATGAAAACATTGAAGACCATTCAGATATTGCAAGGAGCGTCTCAAACACAGAAACGTCAGTTAGGACTCCAGAGTCATCATGTCATGAGAATCTTGATGTGCAGAGTTATGATGCTAATGAACTGAATGCTTCGGCTATTGCCAACTGTTCTACAATCACAGAATCAGAAATTGAAGGGGAAGATACTGATCTGGCATCAAAACATGCTCTCGATGACTTACAGGAACTTTCTGCTCGAAATCCTTCCAATGATTGTCACACTGCTTCTGTTTCCGAGCTCAATGCATCTGAGTCCCATTGCACTGAGGAATCAACCGTTACAGTGGATTGTCCAGGTGCAGGCAACACTAGAAGCCTGACACTTGAAGAGGCAACAGATGCAATCCTTTTTTGCAGTTCTATCATCCATGATCTAGCATATAAAGCTGCAACAATAGCAATGGAAAATGAATGCTCTGGTCCATTCGAAGGTTCTGAACCAACAGTAACTTTATTGGGGAAACCCGATCCTGACAGAAAGGATATTCGCAGACGACCTGTTGGCAAGCGGCCTGTAAAAACTCCAAAGAGCAAACCAAAGAGTGTCGAAACTGGTGTCAAAATTGTTTCTGGCAAGACGGAGAATGATGAAAATATCGTCGAGTCTTTCACAAATAATGCCGGGCTTCCTAACAAAGTAGATAATAGTATGAAGCCCCCAAAGCTTGAATCAAAGTGCAATTGCATAATAATGTGA 3363 0.4359 MPPSPAMRYSPGRETRERDSFLLQSSDDLEDSFATRLRHLSDVNVGISIPGRRGTSDLLNIDGDKNDYNWLLTPPDTPLFPSMDEDPPFANVASRGRPSKPISISRSSTMEKSRRSSRGSASPNRLSPSPRSGTNTSQAGGRPSSLPNYSPTSSSLRYATPTRRSSPPPNKPITPASRSSTFTPRRLSTGSSGSIVSSGVRVNSPVKTTRGNSSSPKIRAWQTNIPGFSSEAPPNLRTSLADRPATYVRGSSPASRNGRESSGRESTPKFSRQSMSPTASRSSSSIQSHDRDPFSSRSKGSVASSGDDDLDSLPSIPVGSLDRLSSRRDGSFSTNRTPAISKKSPRMMSPNSAPKKSFDSAFRQMDRKSPQNMFRPLLSSVPSTTLYAGNANSAHRSLVSRNSSIATSSNATSDRVTIFAQDTEGIDHSQDDMASETDKTLYSDLHEEVFAFDKIDGLDANIEHEINKESVDLLQNQNKGTNTVFGPTDAEGNESSETSHVRDVISETGSFENTAICSQCGCCYQVISQTEENIELCLQCSRKTILLRANLPETVLAVSEGSSAISTNMPKEEESSSVETSQLRTASELSQSPFGEHGYDESQTSCSELNRVRSQNSSNPSSLREGGEHMPTNWLETNQSGVDYKKRNDEIGDQMLDHYSDRPDMDMDLMEGTGISVLLKRSSSNKGPIVRARTFTATTISYDDLSLSRDSLNSIRSSTRPGSYSASSSTDFSSTKQTEFRMHRQLSGRKLDADCGHDLRIKPPSTAGSSFSIPSNHSHHEVGLPNRETSGNTECSPVEEIPQVLHEYQALENTTTDLIQASPIDSTFVEEEKLENDDSSRGNNACSSELLSHTAGVGPDDNIVTSFPDPGGCISYENIEDHSDIARSVSNTETSVRTPESSCHENLDVQSYDANELNASAIANCSTITESEIEGEDTDLASKHALDDLQELSARNPSNDCHTASVSELNASESHCTEESTVTVDCPGAGNTRSLTLEEATDAILFCSSIIHDLAYKAATIAMENECSGPFEGSEPTVTLLGKPDPDRKDIRRRPVGKRPVKTPKSKPKSVETGVKIVSGKTENDENIVESFTNNAGLPNKVDNSMKPPKLESKCNCIIM 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02475 1120 MobiDBLite consensus disorder prediction 98 164 - -
Vifa2g02475 1120 MobiDBLite consensus disorder prediction 1 20 - -
Vifa2g02475 1120 MobiDBLite consensus disorder prediction 175 236 - -
Vifa2g02475 1120 MobiDBLite consensus disorder prediction 765 795 - -
Vifa2g02475 1120 MobiDBLite consensus disorder prediction 714 738 - -
Vifa2g02475 1120 MobiDBLite consensus disorder prediction 561 643 - -
Vifa2g02475 1120 MobiDBLite consensus disorder prediction 267 305 - -
Vifa2g02475 1120 MobiDBLite consensus disorder prediction 1042 1072 - -
Vifa2g02475 1120 PANTHER GASTRIC MUCIN-LIKE PROTEIN 15 1116 - -
Vifa2g02475 1120 MobiDBLite consensus disorder prediction 78 359 - -
Vifa2g02475 1120 MobiDBLite consensus disorder prediction 561 641 - -
Vifa2g02475 1120 MobiDBLite consensus disorder prediction 326 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02475 Vifa-Chr2 648253624 648258128 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02475 - - gmx:100794773 1364.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02475 2 648253624 648258128 Vifa2g02475 2 648253624 648258128 ECH
Vifa2g02475 2 648253624 648258128 Vifa2g02475 2 648253624 648258128 PCT