Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02465 ATGCTTAAATCAGAAAGATCGTTCCATAGCAACCTTCCGATAATTCGAATACCAGGTGATGGTAGATGTATGTTTAGATCAGTGGTCTATGGTGCCTGCCTCAGAACAGGAGACGCACCTCCAAGTCTCACCAAGCAAAAAGAACTTGCAGATGAACTCAGAGCTAAAGTTGTGGATGAATTCATCAAGAGGAGAACAGACACTGAATGGTTTCTTGAGGGTGACTTTAACACCTATACAATGCAAATGAGAAAGTCTCAAGTATGGGGAGGAGAGCCTGAACTTCTCATGTCATCCCATGTTCTAGAGATGCCTATAACAGTGGTGATGCAGGATATGAATTCCAATAACATTAAAGTTATAGCTGAGTATGGTCAAGAGTATGGAAAGGAGAAGCCTATTAGAGTTATATATGATGGTTATGGGCACTATGATGTATTGAAATGTTCAACATGA 456 0.4035 MLKSERSFHSNLPIIRIPGDGRCMFRSVVYGACLRTGDAPPSLTKQKELADELRAKVVDEFIKRRTDTEWFLEGDFNTYTMQMRKSQVWGGEPELLMSSHVLEMPITVVMQDMNSNNIKVIAEYGQEYGKEKPIRVIYDGYGHYDVLKCST 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02465 151 ProSiteProfiles OTU domain profile. 12 150 IPR003323 -
Vifa2g02465 151 Pfam OTU-like cysteine protease 18 140 IPR003323 -
Vifa2g02465 151 FunFam OTU domain-containing protein 2 151 - -
Vifa2g02465 151 Gene3D - 2 151 - -
Vifa2g02465 151 CDD OTU_plant_OTU4-like 11 147 - -
Vifa2g02465 151 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 15 149 - -
Vifa2g02465 151 SUPERFAMILY Cysteine proteinases 10 147 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02465 Vifa-Chr2 645119140 645120054 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02465 K18342 - gmx:100792132 251.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02465 2 645119140 645120054 Vifa2g02465 2 645119140 645120054 ECH