Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02462 ATGTTCGGAGCTCAATCTTCTCCGTCTCCCTTCGGAACCCCTTCTACAACCCCAGCATTCGGTACCCCAAATTTCGGCACCCCATCTTCCACTCCAGGTTTCGGAACCCCAGGTTTCGGAACCCCTTCTTCAACCCCTGCTTTTGGGGCTTCTTCTACTCCTGCTTTCGGCGGTACTTCCCTTTTCTCTTCGCCGTTCTCTTCTCAGCAACAGCAACAACCACAGCAGCAGCAACAAACTTCACTCTTTCAACAATCACCTTCTACCGGTTTCGGATTTCAGAATTCTATGCAAGCGCCACAAGCTACGCCGTTCCCGAATTCTCAATTGACTACTCAAATGGCTAACGTGGCTCCAGTTCCATTCTCTCTAGCTGATCGTGATATTCAAGCAATCCTTGATGCTTATAAGGAAGATCCTGGAAACCCGAAGTATGCTTTTAAGCATTTGTTATTTAGTGTAACAGACCCACAGTTTAGGGCGAAGCCTGCTGGTGTTTCTGATATCATGTGGGCAGAAGCTATGGGGAAGCTTGAGGGTATGGAAAGTGCCGATAGAGAACGTCTGTGGCCACAGCAAGTTCAAGGTTTTAAGGATCTTTCCCAACGCCTTAAGCTCCAAGATGAAGTCATTGTTTCTGATGCAGAGAGATTAAGTGTAACCCAAAGCAATGTTAAAATGCTCCAAAGACATTTTCAAGCTGATACTCTTCCTTGGATTCAAAGACTGAAACAGAAAGAACAGATTCTTCAGCAACGCATTTTAAGAGTGATGAGAATAGTGGAAGCGTTGGAGGGAAAAGGCTGCCGTATTCCATTAACAAAAGGGGAAGCTGAACTCGCCGAGAAATTAGCCACAATAACTAGACAGTTGAAAGGATCTGGAGCAGAATTATCTCGAAGGGTACAAAATCTACTCGGTGTATCCCGAGTCAAGGCTAATAGCAATGAATTTGGTAACTCTGTTTATCTTCCAGGCTCAACCAAAATTCATGAACAGAGTCTGACTGATCTGCAAGAGGTTTTACACCAGCAGATGGATGCCATAGCAAGACTTGGCAGTGTTCTAAAGCGAGATGCGCGGAATATGGAGATTATGATGGCAGAGGACACAGAAACAACAGAAAATGGAAATTTAATGTAA 1143 0.4488 MFGAQSSPSPFGTPSTTPAFGTPNFGTPSSTPGFGTPGFGTPSSTPAFGASSTPAFGGTSLFSSPFSSQQQQQPQQQQQTSLFQQSPSTGFGFQNSMQAPQATPFPNSQLTTQMANVAPVPFSLADRDIQAILDAYKEDPGNPKYAFKHLLFSVTDPQFRAKPAGVSDIMWAEAMGKLEGMESADRERLWPQQVQGFKDLSQRLKLQDEVIVSDAERLSVTQSNVKMLQRHFQADTLPWIQRLKQKEQILQQRILRVMRIVEALEGKGCRIPLTKGEAELAEKLATITRQLKGSGAELSRRVQNLLGVSRVKANSNEFGNSVYLPGSTKIHEQSLTDLQEVLHQQMDAIARLGSVLKRDARNMEIMMAEDTETTENGNLM 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02462 380 Pfam Nucleoporin complex subunit 54 162 306 IPR025712 -
Vifa2g02462 380 PANTHER NUCLEOPORIN P54 1 373 IPR024864 GO:0005643
Vifa2g02462 380 MobiDBLite consensus disorder prediction 1 107 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02462 K14308 - gmx:100797030 563.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02462 2 645029161 645033864 Vifa2g02462 2 645029161 645033864 ECH