Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02454 ATGTTCGGAAAAGTTCTCATTTCTTTCATCATTTCCCTCTTAATCTTCATTCCATGCTCAATCTTGATCGGAACACTCGACATTCGATCTTCTTATCAATCACCGGCGGTTGCTGCAACCTCTCCGTGCACCGATGAAATTCCATTAAGCGTCTACATGTATGATCTTCCCCGGCGGTTTAACGTCGGCATGCTGGATCACCGGAATACAACAGAAGCTCCGGTGACCGCTGTTGACTTTCCTCTATGGCCTGATAATTCCGGTCTCAAGAGGCAGCATAGTGTAGAGTACTGGATGATGGGGTCACTTCTTAACGGTGGCGGAAATGGAAGTGAAGCGGTAAGGGTTTTGGATCCCGAGCATGCTGATGTGTATTTTGTTCCTTTTTTCTCTTCGCTTAGTTTCAATACCCATGGTCATCACATGACAGATCCCGAAACGCAGATTGATCATCAATTGCAGATTGATTTGATGGGATTATTAAGGCAATCCAAGTACTGGCAAAGGTCTGGAGGTAGAGACCATGTATTTCCTATGACACATCCCAATGCATTTAGGTTTCTGCGAGATCAATTGAACAAGTCTATTCAGGTTGTTGTTGATTTTGGTCGTTATCCAAAAGGAGTTTCTAATTTGAACAAGGATGTAGTGTCCCCTTATGTACATGTTGTAGATTCTTATATAGATGATGAGCCTCAAGATCCGTTTGAGTCTCGCACCACTCTGCTTTTTTTCAGAGGGAGGACGCACCGTAAGGATAAAGGCATTGTTCGTGCTAAATTCACAAAGATATTAGCTGGTTTTGACGATGTTCACTACGAACGAAGCTTTGCTACAGGAGAGAACATAAAATTGTCATCTAAAGGGATGCGTTCATCAAAATTCTGTTTGCATCCAGCAGGAGACACACCTTCCTCTTGCCGCCTTTTTGATGCAATCGTGAGTCACTGTGTTCCTGTTATTGTGAGTGATAAAATTGAACTCCCATTTGAGAATGAGATTGACTACTCTCAGTTCTCATTGTTCTTTTCCTTCAAAGAAGCACTGGAGCCAGGCTACATGATTGATCAGCTTCGCAGTTTTCCAAAGCAGAAATGGACTGAAATGTGGAGGCAACTTAAAAACATCTCCCATCATTATGAATTCTATTATCCACCAAAAAGGGAAGATGCTGTTAACATGCTGTGGAGACAGATCAGGCACAAGCTTCCGGAGATAAGACAATCTGTTCATAGAAGCCGGAGGCTTAAAATCTCAGATTGGTGGAAGAGATAA 1275 0.4267 MFGKVLISFIISLLIFIPCSILIGTLDIRSSYQSPAVAATSPCTDEIPLSVYMYDLPRRFNVGMLDHRNTTEAPVTAVDFPLWPDNSGLKRQHSVEYWMMGSLLNGGGNGSEAVRVLDPEHADVYFVPFFSSLSFNTHGHHMTDPETQIDHQLQIDLMGLLRQSKYWQRSGGRDHVFPMTHPNAFRFLRDQLNKSIQVVVDFGRYPKGVSNLNKDVVSPYVHVVDSYIDDEPQDPFESRTTLLFFRGRTHRKDKGIVRAKFTKILAGFDDVHYERSFATGENIKLSSKGMRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSDKIELPFENEIDYSQFSLFFSFKEALEPGYMIDQLRSFPKQKWTEMWRQLKNISHHYEFYYPPKREDAVNMLWRQIRHKLPEIRQSVHRSRRLKISDWWKR 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02454 424 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 48 395 IPR004263 GO:0006486|GO:0016757
Vifa2g02454 424 Pfam Exostosin family 48 354 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02454 Vifa-Chr2 643193734 643195710 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02454 - - gmx:100817069 677.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02454 2 643193734 643195710 Vifa2g02454 2 643193734 643195710 ECH