Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02449 ATGCAAACCAAGAAAAAAGCCTCCAGGCGTAATGGTAGCCGAGAGTGCGTTTCTCCTAGGGCTCCAAGAGCGCAGAAGAAGGTCTCTGAAAATGGCCAGGTGGTTGAAAAAAAAGTGGCGGATTTAATTACATCTTCTGCAAGAAAGATTAAACCTGCTTGCGGTTTTGAGAATAAAGCTATAGAACCAATGCCCATAACTCTTTTGGATAACGAGAACAACACTGTGGGCAAGGGAATTTCCAATACTAATCTGGGAAATGAAGCAGTTGACGGTGCTTCAGTAGATTTTGAGGGTTGTAACAAGCAAGCTCTGCCTCTGGAGACTGGAACTATATTCTCTCCTGGGTTTCACTTATCTAAAGGTGCTGGAGGAAAGGTTGCTGACAGAGTTGATTTTGTCCAAATATTTCGGTGTGAGGATCAAAAAAGAATTTCTCTCGACCAAGTAACACAGTTATCCCAGGAGGATGCAGGAGATGACCATGTTAGTCAAGATTTTGACTCTGCCATGGAAGTAGATATAAACAATTCATCAAACGTGCTTGCTATAAGCACACAAACTGTCAATGGTTGCAGTTCAGATTTTGATGGAAATGGTCTTTCCGTGGAAGTTCCTTCCATATATCTTGCCATGAAAAACTCAAAGCTGGAATGTATTGATGAGCATGGTCAGGACTCTGTATCATCTGATATGTGCCCAGAAGATGATGAATTTGAGGATTTTGACGATTTTGACCCTTACCTATTCATAAAGACTTTACCAGACTTATCAAGGGTTGTTCCCACTTTTAGACGAATGTTGCTACCTAAGCAGACTCGAAGCTGCCCTCCTATTACTCTTGTTCTGGACTTGGACGAAACTTTGGTGCACTCTACCCTAGAACCTTGCGAGGATATAGATTTTACTTTCACTGTGAATTTTAACTGTGAGGAGCACAATGTCTATGTACGTTGCCGTCCTCACCTAAAAGATTTCCTTGAGAGAGTTTCTGGTCTTTTTGAAATTATTATATTTACAGCCAGTCAAAGTATCTATGCTGAGCAACTCCTAAATGTGCTTGATCCCAAGCGGAAGATATTTCGCCATCGTGTATTTCGTGAATCCTGTGTTTATGTGGAGGGGAATTACCTCAAAGATTTAACAGTGCTTGGTCGTGATTTAGCACATGTTATAATAATCGACAACTCCCCACAGGCATTTGGGTTCCAAGTGGACAATGGAATACCGATTGAGAGTTGGTTTGATGATCCTTCAGATAGAGAATTGCTTTTATTGCTCCCTTTCTTGGAGAGTTTGGTAGGAGTTGATGATGTCCGACCCCAAATTGCAAAAAAGTTCAAGCTCCGGGAGAAAATTGCTGCAGCTGCGCATCCTTTAAATACAAGTAGAAGAGTTTTCTTGTCTGAATAA 1413 0.4133 MQTKKKASRRNGSRECVSPRAPRAQKKVSENGQVVEKKVADLITSSARKIKPACGFENKAIEPMPITLLDNENNTVGKGISNTNLGNEAVDGASVDFEGCNKQALPLETGTIFSPGFHLSKGAGGKVADRVDFVQIFRCEDQKRISLDQVTQLSQEDAGDDHVSQDFDSAMEVDINNSSNVLAISTQTVNGCSSDFDGNGLSVEVPSIYLAMKNSKLECIDEHGQDSVSSDMCPEDDEFEDFDDFDPYLFIKTLPDLSRVVPTFRRMLLPKQTRSCPPITLVLDLDETLVHSTLEPCEDIDFTFTVNFNCEEHNVYVRCRPHLKDFLERVSGLFEIIIFTASQSIYAEQLLNVLDPKRKIFRHRVFRESCVYVEGNYLKDLTVLGRDLAHVIIIDNSPQAFGFQVDNGIPIESWFDDPSDRELLLLLPFLESLVGVDDVRPQIAKKFKLREKIAAAAHPLNTSRRVFLSE 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02449 470 MobiDBLite consensus disorder prediction 1 31 - -
Vifa2g02449 470 Gene3D - 264 448 IPR023214 -
Vifa2g02449 470 SMART forpap2 277 421 IPR004274 -
Vifa2g02449 470 FunFam CTD small phosphatase-like protein 2 267 447 - -
Vifa2g02449 470 SUPERFAMILY HAD-like 268 444 IPR036412 -
Vifa2g02449 470 NCBIfam dullard-like phosphatase domain 280 442 IPR011948 GO:0016791
Vifa2g02449 470 CDD HAD_FCP1-like 278 411 - -
Vifa2g02449 470 PANTHER DULLARD PROTEIN PHOSPHATASE 152 448 - -
Vifa2g02449 470 ProSiteProfiles FCP1 homology domain profile. 274 433 IPR004274 -
Vifa2g02449 470 Pfam NLI interacting factor-like phosphatase 280 440 IPR004274 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02449 Vifa-Chr2 640792554 640796496 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02449 K17616 - gmx:100798665 698.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02449 2 640792554 640796496 Vifa2g02449 2 640792554 640796496 ECH