Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02448 ATGGTTGTTGCTCAGAAACTCAAGGAAGCTGAAATCACCGAGCAGGATTCACTTCTTCTGACAAGGAATCTGCTCCGAATTGCCATTTTCAACATTAGTTATATCAGAGGACTATTTCCTGAGAAGTACTTCAATGACAAGTCTGTTCCGGCGTTAGAGATGAAGATAAAAAAGCTTTTGCCAGTGGATGCTGAGTCTCGTAGACTGATTGATTGGATGGAGAAAGGTGTTTATGATGCTTTACAGAAGAAATACTTGAAGACACTTTTATTCTGTGTGTGCGAAGCAGTGGATGGACCAATGATTGAGGAATATGCATTTTCCTTTAGCTATTCGGATTCTGAGAAGCAAGAGGTTTCCATGAATGTCAACCGCACTGGAAGCAAGAAACAGGGGGGAGCCTTCAAGTGTAACTCGACTACAGATATCACTCCCCAGCAGATGAAGAGTTCTGCTTGTAAAATGATAAGAACTCTTGTTCAGTTAATGAGAACTCTAGAGAAAATGCCTGAAGAGCGTACCATTCTGATGAAGCTCCTCTACTATGATGATGTGACGCCAACGGATTATGAGCCTCCTTTCTTCAGGGAATGCACAGAAGAAGAAGCGAATCATCCTTGGGTGAAAAACCCATTGAAAATGGAGGTCGGAAATGTAAACAGCAAGCATTTTGTCTTAGCTCTGAAGGTGAAGAGTGTGCTTGACCCTTGTGAGGATGACAATGAGGTTGTCCAAGATGATATGAGTGACGATTCCATGCAAAATAATGAGTATTATGACACTGACAGTGAGGTTGCTCATTCTCAAGGGGATCAATATATAGTTGCACCCATAGAGAAACAGCAAGCACAGGAAGATCCTGGCGAGATTGATGAAGAGAATACCCAGGACCCTGTTGAAGATGAGCAACAATTGGTTAGGGTCAAGGAGTGGCTCAACTGTTGTCACTTGGATACCATTGATGTTACTGATGTTCTATCAAATTTTCCAGACATCTCAGTGGTTCTGACTGAAGAGATCATGGACAACCTTGTCAAGGAAGGTGTGCTATCAAAAAAAGGGAACGACACCTATGCTATTATTAATAAGGACAAGAAATCTGAATTTGAATTCACCGATGTGAAAGAAGAAAATGATGGTCAAATTCCTCCAGTCCTTGATAGAGCTTTGCAGGGCGAAGATCTCATCTACATGAAGGCTCTCTACTATACTCTTCCATTAGCTTATGTGTCAGTCACAAAGCTTCAAAGCTCCTTCCAGGGAGAAGTAAGCCAAACAGCAGCAAGAAAGATAATTGATAAAATGACCAGGGATGGGTTTGTTGAAGCTAAAGGCAACAAAAGGCTAGGAAAACGCGTGATCCATTCTGAGCTGACCCAGAGAAAATTCATCGAGGTCCAAAAAGCTTTAGGTGCTGCTGAAGCTATGGATGTTGATGACTGTGAACCAAATAGCAAGTCCAAACAAACTGGTTACCGTGTAAATGGAAGCAACCGAGACATCTCAACATGCGGTGTTCTCCACTCAATCGGATCAGATTTAACACGAATGAAAGTGACCTCTGATGCAAATACTACTGACTCCATGAGTGGACCAAACATGCCAAAGGAAAAAGAGCCAGGAAGCACCCCAATAAGCAGGGCTGGGCCAGTTGCTTCAAGGGAGAGTTTTGCGCACAGGAAAGAGATCAGCACAGCAAATGCAAGTGGAATTGCGAACGAAGGCGACGCTGATACAATTATCTGCAGCAAATCGTCCCAGGACAAGCGCCCCAGGAAAACTAGCGCTGTCAAGGAACCTATCCATCAAAATATGAAGCGTCAGAAATTGCAGGCTACATGA 1842 0.4311 MVVAQKLKEAEITEQDSLLLTRNLLRIAIFNISYIRGLFPEKYFNDKSVPALEMKIKKLLPVDAESRRLIDWMEKGVYDALQKKYLKTLLFCVCEAVDGPMIEEYAFSFSYSDSEKQEVSMNVNRTGSKKQGGAFKCNSTTDITPQQMKSSACKMIRTLVQLMRTLEKMPEERTILMKLLYYDDVTPTDYEPPFFRECTEEEANHPWVKNPLKMEVGNVNSKHFVLALKVKSVLDPCEDDNEVVQDDMSDDSMQNNEYYDTDSEVAHSQGDQYIVAPIEKQQAQEDPGEIDEENTQDPVEDEQQLVRVKEWLNCCHLDTIDVTDVLSNFPDISVVLTEEIMDNLVKEGVLSKKGNDTYAIINKDKKSEFEFTDVKEENDGQIPPVLDRALQGEDLIYMKALYYTLPLAYVSVTKLQSSFQGEVSQTAARKIIDKMTRDGFVEAKGNKRLGKRVIHSELTQRKFIEVQKALGAAEAMDVDDCEPNSKSKQTGYRVNGSNRDISTCGVLHSIGSDLTRMKVTSDANTTDSMSGPNMPKEKEPGSTPISRAGPVASRESFAHRKEISTANASGIANEGDADTIICSKSSQDKRPRKTSAVKEPIHQNMKRQKLQAT 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02448 613 MobiDBLite consensus disorder prediction 518 532 - -
Vifa2g02448 613 FunFam Meiosis-specific protein ASY2 5 273 - -
Vifa2g02448 613 SUPERFAMILY The spindle assembly checkpoint protein mad2 11 237 IPR036570 -
Vifa2g02448 613 PANTHER HORMA DOMAIN-CONTAINING PROTEIN 1 4 610 - -
Vifa2g02448 613 ProSiteProfiles HORMA domain profile. 15 230 IPR003511 -
Vifa2g02448 613 MobiDBLite consensus disorder prediction 518 613 - -
Vifa2g02448 613 MobiDBLite consensus disorder prediction 583 605 - -
Vifa2g02448 613 Pfam HORMA domain 17 223 IPR003511 -
Vifa2g02448 613 Gene3D HORMA domain 5 275 IPR036570 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02448 K12778 - gmx:100792473 981.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02448 2 640754193 640758996 Vifa2g02448 2 640754193 640758996 ECH