Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02447 ATGGAAACCTACGAGGTAAAAGTGAAGGCTGAGAACAAGGACAAAGAACTAAAGCGCCTAGGGTTTGTGAAGATCGCTGCTATTCACACATTCGTGTTTGTCTCATATCTGTATAATTCCGCAAAGAAGAATTCTGGGTCTTTGAGATCCGCTGTTGAAACAGTGGAGGGAACAGTAACCACTGTTATTGGTCCTGTCTACAACAAATTCAAGGATGTCCCTGATGATGTCCTGGTTTTTGTTGACCAAAAGGTGGATGAAGCTACTCACAAGTTCAACGAACATGCTCCTACTATTGCTAAGCAGCTTGCAGATAAAACCAAAACTTTGATTCAGAAAGGGTCACATGAAGCAGGGAAGGCAGTGAATGTGGCTCAATCTGAAGGACCACGAGCTGCTGTAAAATATGTTGCTACAGAATCCAAGAGTTTGTTGCTAATCAATTCAGTGAAGCTGTGGGTTGGACTCAACCAATTTCCACCTTTCCATGCAGTTGCTGAAATGGCTGTTCCAACCGCTGCTCACTGGTCTGAGAAATACAACCATGTAATCAAGGCCATGGCTGGAAAGGGTTATAGTTTTGTTGGCTATTTGCCTTTGATTCCTGTTGATGAAATATCCAAGGCATTTAAGCAGGGGAAAGCTAACATGAAAGGAGATAGAGAGGTTTCAGTGGAAAAGAAAGTAGAATAA 693 0.4242 METYEVKVKAENKDKELKRLGFVKIAAIHTFVFVSYLYNSAKKNSGSLRSAVETVEGTVTTVIGPVYNKFKDVPDDVLVFVDQKVDEATHKFNEHAPTIAKQLADKTKTLIQKGSHEAGKAVNVAQSEGPRAAVKYVATESKSLLLINSVKLWVGLNQFPPFHAVAEMAVPTAAHWSEKYNHVIKAMAGKGYSFVGYLPLIPVDEISKAFKQGKANMKGDREVSVEKKVE 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02447 230 Pfam Rubber elongation factor protein (REF) 12 212 IPR008802 -
Vifa2g02447 230 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 13 222 IPR008802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02447 Vifa-Chr2 640751643 640752764 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02447 - - tpra:123905869 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02447 2 640751643 640752764 Vifa2g02447 2 640751643 640752764 ECH
Vifa2g02447 2 640751643 640752764 Vifa2g02447 2 640751643 640752764 PCT