Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02444 ATGTACGAATCGGAGAATAACCGTGAAGATTCGGAGCGAACGGCTTTCCGACGAACGGAGAAGAAGTACAAGCTCTACTTCGATAACAATGCTTCTTCCAAGAACAAAAAGAATAAACAACCCAAACCGGTGGACTTAACGGAGGACAAATTCAGTTCTCCAGTTTTCTCTTTGCAAAATCACCCTGGCTTTTATTTTATCCCTGGGGCGTTAAGCTTAGAGAAACAATGTGATTTGATAAGGGAGAGTTTAACTGAATTTCCGCAGCCACCTAACAGAACTAATCACAATGCTATATATGGTCCTATACACAATTTATTTGTTGCGGCTAAAGAAGGGAAAGTTTTGGTTGAAGAGAAATCTGCAATTACTTCGCATGAATGTAGTTCTGATTTGAATTGTAGGGGTGGTGAGGAATGGAAGTTTTTCACGGAAAAGGAAGCGTCCTTGAGAAAATGCAGATCTGTTTCTGGTTCTTCTTTGCTGCGAAAGTTGCGATGGAGCACCCTTGGCTTACAGTTTGATTGGTCCAATAGAAATTATAATGTGTCTCTCCAGCATAACAAAATCCCTGAAGCACTCTGTGAGCTTGCCAAACAATTGGCAAAACCTGCATTACCTGCTGGTGTTGAATTCCAGCCTGAAGCCGCGATAGTAAATTACTTTGCATCAGGAGACACACTGGGTGGCCACCTTGATGATATGGAAGCAGATTGGAGTAAGCCCATAGTTAGTTTAAGCTTGGGCTGTAAAGCCATTTTCTTATTGGGAGGAAAATCTAGAGAAGATGCTCCCCTGGCGATGTTTCTTCGGAGTGGGGATGTTGTACTCATGGCTGGAGAAGCAAGGGAATGCTTTCATGGTGTTCCTCGGATCTTCACTGACAAAGAAAATGCTGAGATAGGCCATCTTGAGACACACTTGAGGCAAGAAGATGATCTTTGTTTCCTAAAGTATATTCAAACTTCAAGAATCAACATCAATATCAGACAAGTTTTTTAA 1002 0.4172 MYESENNREDSERTAFRRTEKKYKLYFDNNASSKNKKNKQPKPVDLTEDKFSSPVFSLQNHPGFYFIPGALSLEKQCDLIRESLTEFPQPPNRTNHNAIYGPIHNLFVAAKEGKVLVEEKSAITSHECSSDLNCRGGEEWKFFTEKEASLRKCRSVSGSSLLRKLRWSTLGLQFDWSNRNYNVSLQHNKIPEALCELAKQLAKPALPAGVEFQPEAAIVNYFASGDTLGGHLDDMEADWSKPIVSLSLGCKAIFLLGGKSREDAPLAMFLRSGDVVLMAGEARECFHGVPRIFTDKENAEIGHLETHLRQEDDLCFLKYIQTSRININIRQVF 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02444 333 PANTHER ALKYLATED DNA REPAIR PROTEIN ALKB-RELATED 29 332 IPR004574 -
Vifa2g02444 333 FunFam Alpha-ketoglutarate-dependent dioxygenase alkB 123 332 - -
Vifa2g02444 333 MobiDBLite consensus disorder prediction 27 46 - -
Vifa2g02444 333 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 213 333 IPR005123 -
Vifa2g02444 333 Pfam 2OG-Fe(II) oxygenase superfamily 144 330 IPR027450 -
Vifa2g02444 333 SUPERFAMILY Clavaminate synthase-like 62 332 - -
Vifa2g02444 333 Gene3D - 116 332 IPR037151 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02444 K10765 - gmx:100797068 553.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02444 2 637807232 637812084 Vifa2g02444 2 637807232 637812084 ECH