Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02441 ATGAAGAACCGTTATCCACTCCAACAGAGAAAGCTATTCATCGGATTAGCCACCATCGGGTTAATCGGAGCAGCACTCTTCATCGCCACCGCAATCACCGCCTCCGACACATCCTCATTACACTGTCCAATCTCAACCGGAATCCAAACCAGATCAAACGACAACAACAACAACCCAACACCGATCCAGCTCCAATCAATTCTCCACTACGCCACATCCCGCGTCGTCCCTCAACAATCTGTCTCCGAGATCAAGATCAGTTTCGATGTATTGAAATCCTACAACCGTCCCTGCAACTTCCTCGTCTTCGGACTCGGTCACGATTCTCTCATGTGGGCATCCTTTAATCCAGGCGGCTACACGCTCTTCCTCGAAGAAGATCCCCGATGGGTTCAAACCGTTCTAAAGGACGCACCGGGCCTCCGGGCTCATACCGTCCGTTACCGAACGCAGCTCCGTGAAGCCCACAAGCTCATCACGACTTACCGCTCCGAGCCCACGTGTTCCCCTTCTAAAGCCTTCCTACGTGGCAACAAAGCTTGTAAGCTCGCGCTTGAGAATCTACCAGATGAAGTTTACGATACGGAGTGGGACCTTATTATGCTCGACGCGCCTAAAGGTTACTACGCGGAGGCTCCGGGACGTATGGCCGCCGTGTTCTCCGCTGCTGTTATGGCGAGGAACAGAAAGGGATCTGGTGTGACGCATGTTTTTCTGCATGATGTGGATCGTAGGGTGGAGAAGGCTTATGCTGAAGAGTTTCTTTGTAAGAAGAATATGGTTAAGGGTGCTGGAAGGCTTTGGCACTTCATGATACCACCGTCTAACAACACCGACGATACTCGTTTCTGTTAA 855 0.5135 MKNRYPLQQRKLFIGLATIGLIGAALFIATAITASDTSSLHCPISTGIQTRSNDNNNNPTPIQLQSILHYATSRVVPQQSVSEIKISFDVLKSYNRPCNFLVFGLGHDSLMWASFNPGGYTLFLEEDPRWVQTVLKDAPGLRAHTVRYRTQLREAHKLITTYRSEPTCSPSKAFLRGNKACKLALENLPDEVYDTEWDLIMLDAPKGYYAEAPGRMAAVFSAAVMARNRKGSGVTHVFLHDVDRRVEKAYAEEFLCKKNMVKGAGRLWHFMIPPSNNTDDTRFC 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02441 284 PANTHER OS11G0490100 PROTEIN 10 284 IPR006514 GO:0045492
Vifa2g02441 284 Gene3D Vaccinia Virus protein VP39 75 282 IPR029063 -
Vifa2g02441 284 NCBIfam TIGR01627 domain 65 284 IPR006514 GO:0045492
Vifa2g02441 284 Pfam Polysaccharide biosynthesis 83 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02441 Vifa-Chr2 637056937 637057791 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02441 - - gmx:100791951 449.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02441 2 637056937 637057791 Vifa2g02441 2 637056937 637057791 ECH
Vifa2g02441 2 637056937 637057791 Vifa2g02441 2 637056937 637057791 PCT