Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02440 ATGAAACACCAAACATTGACATGCCTATGTGTTCTGGCTCTCACCATCACAGTTTGTTCCAACACAGCAAACGGAGCAGAAGACTTGGCCAAAACATGTGGTCAAGTGGTTTCAAAGGTGATTCCATGTTTGGACTTTGCGACGGGGAAAGCACCGGCGCCGAAGAAGGAATGCTGTGATGCAACGAAGAGTATAAAGGATACGGATCCAGAGTGTCTATGCTATATCATTCAACAGACTCATAAGGGGAGCCCTGAAAGTAAGAGCATGGGGATTCAAGAGGATAAGCTTCTTCAACTTCCTGCTGTTTGTGGTGTTAAAGCCAACATCTCTGATTGTCCAAAGCTTCTGGGTCTATCTCCAACCTCTTCGGACGCAGCAATATTCAAAAACTCATCCAAGATCAACCCGCCTTCATCAGCCGCATCATCCACCGGAACTCCGACCCCACCGACCCCAAGCGGCTCACATAAGCTTAGACCAGTCATGATCAGCGACGTGATGATGGTGACTCTAGCCTTTGTTCTTGCCGCAGTACCTACCGGATTAATCGCCATTAAATTGTGA 567 0.4762 MKHQTLTCLCVLALTITVCSNTANGAEDLAKTCGQVVSKVIPCLDFATGKAPAPKKECCDATKSIKDTDPECLCYIIQQTHKGSPESKSMGIQEDKLLQLPAVCGVKANISDCPKLLGLSPTSSDAAIFKNSSKINPPSSAASSTGTPTPPTPSGSHKLRPVMISDVMMVTLAFVLAAVPTGLIAIKL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02440 188 Gene3D - 29 111 IPR036312 -
Vifa2g02440 188 PRINTS Plant phospholipid transfer protein signature 53 67 IPR000528 GO:0006869|GO:0008289
Vifa2g02440 188 PRINTS Plant phospholipid transfer protein signature 91 108 IPR000528 GO:0006869|GO:0008289
Vifa2g02440 188 PRINTS Plant phospholipid transfer protein signature 32 48 IPR000528 GO:0006869|GO:0008289
Vifa2g02440 188 MobiDBLite consensus disorder prediction 134 153 - -
Vifa2g02440 188 CDD AAI_LTSS 42 106 - -
Vifa2g02440 188 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 11 164 IPR043325 -
Vifa2g02440 188 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 31 114 IPR036312 -
Vifa2g02440 188 SMART aai_6 33 113 IPR016140 -
Vifa2g02440 188 Pfam Probable lipid transfer 20 113 IPR016140 -
Vifa2g02440 188 MobiDBLite consensus disorder prediction 134 158 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02440 33 176 Acyl Lipid Metabolism Gene Families AT1G27950 46.309 1.15e-39 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02440 - - adu:107482371 195.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02440 2 635826020 635828200 Vifa2g02440 2 635826020 635828200 ECH
Vifa2g02440 2 635826020 635828200 Vifa2g02440 2 635826020 635828200 PCT