Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02434 ATGGAAGGCCTGGCCATGCTGAAGCAGCTAATCGGTCAGCTTCAGCACCTCCTCGACTCTCAATCTCATCATTCTTCTTCTCATCACACTATCCTCCTTCAACAAAACCCCAGATGGACTGCGTTTGACATCGAAAATGGCTCTGTAGATGATTGTTTTGGCGTTGAAATGGCAGCTGGAAAGTCTCATAGTTTCAGGATGTCGGAGCCTCTAAAGCCTCCACCCGCTAAGAAGCCTCGAAGAGATCGAAGCAAGGGCAAATCGTCAGGAAGATCCTGTACAAGTGAAGTTATGGAACAAGAAATCTGGAAAGATTTTCCTGAAGATTTGTTTGAGGCAGTAATTGCACGACTTCCCATTGCCACTTTTTTCCGCTTCCGTTCTGTATGCCGACGATGGAGTTCTTTGCTGGCTTCTCAAAGCTTTTCTCAGCATTGTGCCGAAATCCCACAAGAAAATCCATGGTTTTACACCATAACCCATGAAAATGTGAATTCAGGAGCCATGTATGACCCTTCTTTGAAAAAGTGGCATCATCCTTCTATATCAGCAATGCCCACAAAGTTGATTGTTTTGCCAGTGGCTTCTGCAGGGGGATTAGTTTGCTTTTTGGACATTGGCCATCGAAACTTCTATGTATGTAACCCGCTGACTCAATCCTTCAAGGAGTTGCCAGCTCGGTCAGTGAGGGTCTGGTCTCGCGTTGCTGTAGGGATGATTGCGAATGAAAAATCTGCTGGTTCAGGCTACAAGATCCTATGGGTGGGTTGTGATGGAGAACATGAAGTTTATGACTCGGTGAAAAACTCTTGGAGCCGTCCAGGAAACATGCCTGGAAATGTGAAGCTGCCATTGGCCCTTAACTTTAGGTCACAAGCTGTCTCTATTAACAGTACACTTTACTTCATGCGTTCAGATCCAGAAGGGGTTGTTTCTTATGATATGGCAACGGGAGTTTGGAAACAATACATAATCCCAGTGCCATTGCATCTGACTGACCACACTCTGGCTGAGTATGATGGCCAAATCATGCTTGCAGGATTGCTCACAAAGAATGCAGCCACGTGTGTATGCATATGGGAGCTGCAGAAAATGACGCTCTTGTGGAAGGAGGTAGACAGAATGCCAAATGTATGGTGCTTGGACTTTTATGGTAAGCACGTTAGAATGACTTGCCTGGGTAACAAAGGCTTGCTCATGTTGTCCCTGAGATCAAAACAAATGAATCGGTTGGTTACTTACAACATAGCAAAGAAGGAATGGCTGAAGGTTCCCGGGTGTGTGGTGCCGCACGGGAGGAAACGGCAGTGGATAGCATGTGGTACTGCATTTCATCCATGCCTGACAGCCGTGGCTTGA 1359 0.4628 MEGLAMLKQLIGQLQHLLDSQSHHSSSHHTILLQQNPRWTAFDIENGSVDDCFGVEMAAGKSHSFRMSEPLKPPPAKKPRRDRSKGKSSGRSCTSEVMEQEIWKDFPEDLFEAVIARLPIATFFRFRSVCRRWSSLLASQSFSQHCAEIPQENPWFYTITHENVNSGAMYDPSLKKWHHPSISAMPTKLIVLPVASAGGLVCFLDIGHRNFYVCNPLTQSFKELPARSVRVWSRVAVGMIANEKSAGSGYKILWVGCDGEHEVYDSVKNSWSRPGNMPGNVKLPLALNFRSQAVSINSTLYFMRSDPEGVVSYDMATGVWKQYIIPVPLHLTDHTLAEYDGQIMLAGLLTKNAATCVCIWELQKMTLLWKEVDRMPNVWCLDFYGKHVRMTCLGNKGLLMLSLRSKQMNRLVTYNIAKKEWLKVPGCVVPHGRKRQWIACGTAFHPCLTAVA 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02434 452 PANTHER BNACNNG10540D PROTEIN 79 445 - -
Vifa2g02434 452 SUPERFAMILY Galactose oxidase, central domain 167 432 IPR011043 -
Vifa2g02434 452 SMART fbox_2 106 146 IPR001810 GO:0005515
Vifa2g02434 452 MobiDBLite consensus disorder prediction 64 93 - -
Vifa2g02434 452 ProSiteProfiles F-box domain profile. 100 145 IPR001810 GO:0005515
Vifa2g02434 452 FunFam F-box only protein 6 153 439 - -
Vifa2g02434 452 FunFam F-box only protein 6 103 142 - -
Vifa2g02434 452 SUPERFAMILY F-box domain 98 176 IPR036047 GO:0005515
Vifa2g02434 452 CDD F-box_AtFBW1-like 105 142 - -
Vifa2g02434 452 Gene3D - 103 142 - -
Vifa2g02434 452 Gene3D - 149 438 IPR015915 GO:0005515
Vifa2g02434 452 Pfam F-box domain 103 141 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02434 Vifa-Chr2 631912439 631916657 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02434 - - gmx:100795488 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02434 2 631912439 631916657 Vifa2g02434 2 631912439 631916657 ECH
Vifa2g02434 2 631912439 631916657 Vifa2g02434 2 631912439 631916657 PCT