Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02415 ATGGCCACCTTCTCTGCAACTCTAGGCCCCTTCGGTGCCATCTCCTTCCTCTCATCTTCCCAATCACAACAACCACTCGACTCTTCTTACTCTATCCTCAACCCATTCATTTCCCTTAAATACCCCCGCAAGTTCCCACTCTGCCACTGGCATCGACATTATAAACACCACACCTCTAAAATCTCAGTCTCTAGTAATGGTAATACTCAAATCGATGAACTCGATAGTACTCTTCTTCAACGCCCTCTTGTTCCTAACTCCGTGGAGGCCCTTCGCCTAGCTCGGAGATCGTCAGATTGGAAGGCTGCAACCGCATACAGAGATAGTAAGCTCGTTTACAACGGTAGGGTTGAGGGTTTTAATGCCGGTGGCCTGCTCATTCGGTTTTACTCTATCATGGGTTTTCTCCCATTCCCTCTCTTGAGCCCAGTCCATTCATGTCAAGAACCAAGTAAATCTATTCAAGATATTGCGAAAGAAAAGATCGGTTCCATCTTATCAGTAAAGGTAATTACCGTAGATGAGGAGAAAAGGAAATTGGTCTTATCTGAAAAGGATGCTACCTGGTCTAAATTTTCAAAATATATCAACATAGGGGACATTTTTGAAGCAAGAGTTGGTTCTGTTGAGGACTTTGGTGCTTTTGCTTATCTGCGCTTCCCTGACGGTCTTTATCACATTTCCGGGTTAATACATATCTCAGAAGTGTCATGGGATCTAATTCAAGATGTAAGAGATATCTTAAAAGAAGGCGAAGAAGTGAGGGTCAAAGTTATTAGTATTGATAGTGTAAGATCGAGGCTTGCACTTTCAATTAAACAGCTAGAAGAAGACCCACTTCTAGAAACTCTGGACAAAGTAATACCTCAGGATGGTTTAGCCATTTCTGGTTCTCTCAGCCGTAGTAATAGCAGTCGCATTGATCCCCTACCAGGGCTTGATATAATTCTTGAGGAGCTACTGCAGGAAGATGGCATATACGATGCAAGAATCAGTCGTCAGGGGTTTGAAAAACGAGTGGTCTCACAAGACTTGCAGCTTTGGCTTTCTAATGCACCTCCCTTGGACCAAAGGTTTACTCTCCTTGCTCGAGCTGGAAGACAGGTGCAGGAAATACTTCTGAAAACATCACTTGATCAGGAAGGCATAAAAAAGGCAATACAACGAGTATTGGAGCGTGTTCCCTGA 1188 0.4369 MATFSATLGPFGAISFLSSSQSQQPLDSSYSILNPFISLKYPRKFPLCHWHRHYKHHTSKISVSSNGNTQIDELDSTLLQRPLVPNSVEALRLARRSSDWKAATAYRDSKLVYNGRVEGFNAGGLLIRFYSIMGFLPFPLLSPVHSCQEPSKSIQDIAKEKIGSILSVKVITVDEEKRKLVLSEKDATWSKFSKYINIGDIFEARVGSVEDFGAFAYLRFPDGLYHISGLIHISEVSWDLIQDVRDILKEGEEVRVKVISIDSVRSRLALSIKQLEEDPLLETLDKVIPQDGLAISGSLSRSNSSRIDPLPGLDIILEELLQEDGIYDARISRQGFEKRVVSQDLQLWLSNAPPLDQRFTLLARAGRQVQEILLKTSLDQEGIKKAIQRVLERVP 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02415 395 SMART S1_6 197 273 IPR022967 -
Vifa2g02415 395 SMART S1_6 108 185 IPR022967 -
Vifa2g02415 395 Gene3D - 100 192 IPR012340 -
Vifa2g02415 395 SUPERFAMILY Nucleic acid-binding proteins 197 286 IPR012340 -
Vifa2g02415 395 ProSiteProfiles S1 domain profile. 199 273 IPR003029 GO:0003676
Vifa2g02415 395 ProSiteProfiles S1 domain profile. 110 185 IPR003029 GO:0003676
Vifa2g02415 395 PANTHER OS03G0844900 PROTEIN 54 395 - -
Vifa2g02415 395 Pfam S1 RNA binding domain 197 273 IPR003029 GO:0003676
Vifa2g02415 395 Gene3D - 193 275 IPR012340 -
Vifa2g02415 395 SUPERFAMILY Nucleic acid-binding proteins 112 185 IPR012340 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02415 - - gmx:100798303 517.309