Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02414 ATGGCTCTGTATGGTTCTTCTATATCTTCACACAATTTGAATTGGAAAATTGGGACAAGAAACATATCAAAATCTACTTCTTTTTCTATGAATTCTGATACCACAATCTCGTTATCGTTTTCTGGGAGTGTTTCCATGGGCCTTAACTTTAGGTTGAATCTTGCCTCTTCAACTTGTAGTGTTAAGAGAAATGGGTTTAGGAACCATGGTTCTCGTTTGAAGGTTGTTTGTATTGATTATCCAAGGCCTGAGCTTGAAAATACCGTTAATTTTGTTGAAGCTGCTTACTTGTCTTCCACCTTTCGTGCTTCTCCTCGCCCAACTAAACCTTTGAAGGTTGTTATTGCTGGTGCAGGACTGGCTGGTTTATCAACTGCAAAATATTTGGCAGATGCTGGTCACAAGCCTATATTGCTGGAGGCAAGAGACGTTCTAGGTGGAAAGGTTGCTGCATGGAAAGATGAAGACGGAGACTGGTATGAGACTGGCCTACATATATTTTTTGGGGCTTACCCTAATGTGCAGAACTTATTTGGAGAACTCGGTATAAACGATCGGTTACAATGGAAGGAACATTCTATGATCTTTGCTATGCCAAGCAAGCCTGGACAGTTTAGTCGATTTGATTTTCTCGAAGTCCTTCCATCTCCATTAAATGGAATATGGGCAATCTTGAAGAATAACGAGATGCTGACCTGGCCAGAGAAAATCAAATTTGCAATTGGACTTCTGCCAGCTATTCTTGGAGGACAGGCCTATGTTGAGGCTCAAGATGGTCTTTCTGTTAAAGAATGGATGAAAAAGCAGGGCATTCCTGAACGGGTAACTGATGAAGTGTTCATAGCAATGTCAAAGGCTCTAAACTTCATCAACCCTGATGAACTTTCAATGCAATGTATTTTGATTGCATTAAACCGATTTCTTCAGGAGAAGCATGGTTCTAAGATGGCCTTTTTGGATGGCAATCCCCCGGAAAGACTCTTAAAGAGCTTTTTACTAACTAATGGGAAAGTGATCGAAGGGGATGCTTACGTGTGTGCAGCACCAGTGGATATTCTGAAGCTTCTTCTGCCTGAGAACTGGAAAGGGGTTCCTTATTTCCAGAGATTGGAGAAATTAGTTGGAGTTCCGGTCATAAATGTTCACATATGGTTTGACAGAAAACTGAAGAACACATATGATCATCTTCTCTTTAGCAGAAGTCCCCTTCTGAGTGTATATGCTGACATGTCGGTAACTTGTAAGGAATATTACAACCCAAACCAGTCTATGTTGGAGCTGGTCTTCGCACCAGCGGAAGAATGGATTTCATGCAGTGATGAAGATATTATTGATGCTACAATGTCTGAACTTGCCAAACTCTTCCCTGATGAAATTTCTGCAGACCAAAGCAAAGCAAAAATCATCAAGTACCACGTTGTTAAAACGCCAAGGTCGGTTTACAAAACTGTTCCAAATTGCGAGCCTTGTCGTCCCATACAAAGATCTCCTATAGAAGGTTTCTATTTATCAGGAGATTACACAAAACAAAAATATTTAGCTTCCATGGAAGGCGCTGTTCTTTCTGGGAAGCTTTGTGCACAGGCTATTGTACAGGATTCAGAGCTACTTACTGCTCGGAGCCAGAAAAGAATAGCTCAAGCAAGTACTGCTTAA 1656 0.4106 MALYGSSISSHNLNWKIGTRNISKSTSFSMNSDTTISLSFSGSVSMGLNFRLNLASSTCSVKRNGFRNHGSRLKVVCIDYPRPELENTVNFVEAAYLSSTFRASPRPTKPLKVVIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKVAAWKDEDGDWYETGLHIFFGAYPNVQNLFGELGINDRLQWKEHSMIFAMPSKPGQFSRFDFLEVLPSPLNGIWAILKNNEMLTWPEKIKFAIGLLPAILGGQAYVEAQDGLSVKEWMKKQGIPERVTDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLLKSFLLTNGKVIEGDAYVCAAPVDILKLLLPENWKGVPYFQRLEKLVGVPVINVHIWFDRKLKNTYDHLLFSRSPLLSVYADMSVTCKEYYNPNQSMLELVFAPAEEWISCSDEDIIDATMSELAKLFPDEISADQSKAKIIKYHVVKTPRSVYKTVPNCEPCRPIQRSPIEGFYLSGDYTKQKYLASMEGAVLSGKLCAQAIVQDSELLTARSQKRIAQASTA 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02414 551 PANTHER PROTOPORPHYRINOGEN OXIDASE 101 329 - -
Vifa2g02414 551 SUPERFAMILY FAD/NAD(P)-binding domain 108 532 IPR036188 -
Vifa2g02414 551 Pfam Flavin containing amine oxidoreductase 333 530 IPR002937 GO:0016491
Vifa2g02414 551 Pfam Flavin containing amine oxidoreductase 120 317 IPR002937 GO:0016491
Vifa2g02414 551 Gene3D - 108 322 IPR036188 -
Vifa2g02414 551 Gene3D - 329 541 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02414 Vifa-Chr2 625163059 625169450 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02414 K02293 - gmx:547970 931.784