LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa2g02402	ATGGCAGTCTCTCAAGAAGACATTGCTTATGAGATATTTTCTTGGTTACCGGCAAAAACCATTTGTAAATTTGGATTAACTTGCACTTCATTCTCAAATTTTCAAAAAGAATCTCATTTCAAAACAAAACAGTCTTGTAATTTGTTAGGGATGAATGATACATGTTTCTTCCTACAACATGATCAGATAAGTCAAAGGTATCAAAAAAGGATTGAGTTGCACCACTTACCTAAAGAGCAGCAACAATTGTCTGGTGTTCCTGATAATGTTCTCACATTCCTATCAAATTCAGCTTGTGTCCTAGCTTCTAGTAATGGTTTGCTTCTTTGTCATACCATCAATGATGATCCATTTGAATTGTTTATTTGCAATCCTATTACAAAGAGTTGCTTTTTCATTCCTACTCCAGAGTCGGTTAGAAAAAATCATAACAATTCTAATATAAATATCATGTTAGATTGCACTCATTGCTCTTCTGATGACTATTTGATGTTTTATTTTGAAAATACAAACGAATGGTCACTAACAAGTTATACATGCAATATTTATCATGGAAAAGAAGGTGCATGGAAAGGAGTGGAAAACAACTTTTTAAGTGGTGGTAGGAACATGAAATTTGACACGCCGGTGATACATAATGGAACACTTCATTTTATTTCGGATTGTTCTAATTACTTTACGAGATTGAGTCCTTTCTATAAGCCATATATAATGTCTTATAGTTTTGTGGAAGGAACTTCAAGTATTCTCAAGTTGCCAAGGGAAGCTATAAAAGGTTTTCATGTCGAGTGCAACATGGGCATATTTAATTGGGGTAAGGTGACAAGTTCCAATAGTTCTATATGTTTAGTGAAATCAAGAAAGTCGGTTTTTACCATTTGGATTTTAAAAGATTACAAGTCATGTTCATGGCAAAAGATTTTAAAAGTGAGAGTGAATGCATTGGGGTTAGAAGAGAAAGATGCTCATGTTACCGGATTTACTGTCATGAACGGCAATATTTTAGTTTTTTCTACGAAACACAAGATTTATAGTTGTGGTTTGGATGAAGAAACATTCATGATGGTTGAGGAAATAGGCTCACACAGTTGTGGATCGAATCCTCACTTTATTTCTTACTCAAACACTCTTCGTTCGTGTGGGGCTAATGATAAAACCATGTCTTGCTAG	1170	0.3427	MAVSQEDIAYEIFSWLPAKTICKFGLTCTSFSNFQKESHFKTKQSCNLLGMNDTCFFLQHDQISQRYQKRIELHHLPKEQQQLSGVPDNVLTFLSNSACVLASSNGLLLCHTINDDPFELFICNPITKSCFFIPTPESVRKNHNNSNINIMLDCTHCSSDDYLMFYFENTNEWSLTSYTCNIYHGKEGAWKGVENNFLSGGRNMKFDTPVIHNGTLHFISDCSNYFTRLSPFYKPYIMSYSFVEGTSSILKLPREAIKGFHVECNMGIFNWGKVTSSNSSICLVKSRKSVFTIWILKDYKSCSWQKILKVRVNALGLEEKDAHVTGFTVMNGNILVFSTKHKIYSCGLDEETFMMVEEIGSHSCGSNPHFISYSNTLRSCGANDKTMSC	389

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa2g02402	389	CDD	F-box_SF	6	34	-	-
	Vifa2g02402	389	PANTHER	F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED	6	349	-	-
	Vifa2g02402	389	NCBIfam	F-box protein interaction domain	105	342	IPR017451	-
	Vifa2g02402	389	SUPERFAMILY	F-box domain	7	49	IPR036047	GO:0005515

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vifa2g02402	Vifa-Chr2	621685556	621686725	Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vifa2g02402	-		-	psat:127079868	657.907