Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02397 ATGGCAAAAAATCACCCAAACCACCGCTTCCTTATCATCTCATACCCTATACAAGGTCACATAAACCCCGCCCTCCAATTCGCCAAGCGACTCACTACTTTAGGTGCACGCGTTACTTTTGCTACAACGATCTACTTACACAGTCGCCTTGTCAACAAACCAACCATCCCCGGCCTCTCCTTCGCCACTTTCTCCGACGGCTACGACGACGGACTCATAACCAGGGAAGACACGAATATAGTCTCCTACGTATCCGAGCTTACGCGCTGCGGCTCAGAGTTTCTCAAAAGCATAATACTCTCCGCCAAAGAAGAAAACCGTCCATTCACTTGCTTAACCTACACCATCATGCTTCCTTGGGCTGCCAAGGTGGCGCGTGAGCTTCATCTCACATCGGTGCTACTGTGGATTCAAGCAGCAACAGTTTTTGATATCTACTATTACTATTTTCATGAACATGGTGACTACATCAAAAACATATCAGAGGATACCATAGAATTACCAGGATTGCCATTTTCTCTTAAGAGTTGTGACATTCCCTCTTTTTTATTGGCTTCAAATCCTTACACTTTTGCGCTTCCATCTGTTAAAGAACACATTCAAATTCTCGAAGAAGAAGCCAACCCGAGAATACTTGTGAACACAGTTGAGAAATTTGAATATGAAGCACTGAGAGACGTTGACGTTGGTAAGATCGAAATGATACCGATTGGACCGTTGATTCCGTCTGCTTTCTTGGACGGTAAGGATCCTTCGGATACTTCGTTTGGTGGTGATGTTATTAGTGTCAATCCGGAGGATAACTACCTTAAATGGTTAGATTCAAAAGATGAACTGTCTGTTGTTTATGTTTCATTCGGTACTCTTGCTATTTTGTCTAAGAGACAAATGGAGGAAATTGCACGTGCGTTGTTGGATTCTGGATTACCATTTTTATGGGTGATTAGAGATACAAAATCACAGAAACAAAAAGAAGAAGATGACCATGGTGATGGTGATGATGATGATGAGTTAAGTTTTAGGGAGGAACTTGAGAGGAATGTTAATGGAAAGATAGTGAAATGGTGTTGTCAAGTGGAGGTTCTGTCGCATAGTTCAATAGGATGTTTTGTGACGCATTGTGGATGGAATTCAACGTTGGAAAGTTTAGGTTCAGGAGTTCCTATGGTGGGGTTTCCTCAATGGACAGATCAAACTACTAATGCAAAGTTAATTGAAGATGTGTGGGGGAGTGGAGTGAGGATGGGTTGTGATGAGGAAGGGATATTGAAAGCTGAGGAGATTAGGAGGTATTTGGAAGTGGTTATGGGGAAGGGAGAAAAAGGAGAGGAACTTAGGAGGAATGCTAAGAAATTGAAGAGTTTGGCTAGGGAAGCTGTGAAGGAAGGAGGGTCTTCGGATAAGAATTTGAGGAGTTTTTTAGATGATATTGGATGTGTGAGTGAGAGATAG 1452 0.4256 MAKNHPNHRFLIISYPIQGHINPALQFAKRLTTLGARVTFATTIYLHSRLVNKPTIPGLSFATFSDGYDDGLITREDTNIVSYVSELTRCGSEFLKSIILSAKEENRPFTCLTYTIMLPWAAKVARELHLTSVLLWIQAATVFDIYYYYFHEHGDYIKNISEDTIELPGLPFSLKSCDIPSFLLASNPYTFALPSVKEHIQILEEEANPRILVNTVEKFEYEALRDVDVGKIEMIPIGPLIPSAFLDGKDPSDTSFGGDVISVNPEDNYLKWLDSKDELSVVYVSFGTLAILSKRQMEEIARALLDSGLPFLWVIRDTKSQKQKEEDDHGDGDDDDELSFREELERNVNGKIVKWCCQVEVLSHSSIGCFVTHCGWNSTLESLGSGVPMVGFPQWTDQTTNAKLIEDVWGSGVRMGCDEEGILKAEEIRRYLEVVMGKGEKGEELRRNAKKLKSLAREAVKEGGSSDKNLRSFLDDIGCVSER 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02397 483 CDD GT1_Gtf-like 9 459 IPR002213 GO:0008194
Vifa2g02397 483 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 10 470 - -
Vifa2g02397 483 FunFam Glycosyltransferase 260 458 - -
Vifa2g02397 483 Coils Coil 442 462 - -
Vifa2g02397 483 MobiDBLite consensus disorder prediction 459 483 - -
Vifa2g02397 483 Gene3D Glycogen Phosphorylase B; 255 458 - -
Vifa2g02397 483 FunFam Glycosyltransferase 13 259 - -
Vifa2g02397 483 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 477 - -
Vifa2g02397 483 ProSitePatterns UDP-glycosyltransferases signature. 355 398 IPR035595 -
Vifa2g02397 483 Gene3D Glycogen Phosphorylase B; 13 470 - -
Vifa2g02397 483 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 272 412 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02397 Vifa-Chr2 620381021 620382472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02397 1 476 Glycosyltransferase AT4G15550 47.791 9.67e-141 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02397 - - mtr:11438516 697.197