Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02394 ATGGCTTCGTTTTGCCCCGTCACTCCCCAATCTCTCTTCTCCACTTCACATTTTCCACATCGCACCTTTCAACCTCACTCCCTACTCCCCCTCCATTCTTCACACTTGTTTAGGAAGAGTGTTAGTTCACTATGGGGAACAGACTCACCAACCTTCAAGATACACTCTTCACTTACAGATTTTACAGTGGATGTAGCTGTAGAGGAGAAAAAGCTACCAAAAGGAGAAACTTGGTCTGTTCACAAGTTTGGTGGGACTTGTGTGGGAAGTTCAGCGAGGATAAACAATGTTGCAGATGTAATTATCAATGATGATTCTGAGAGGAAGTTGGTGGTGGTGTCTGCTATGTCAAAAGTAACAGATATGATGTATGATCTCATATACAAGGCTCAGTCTCAGGATAAGTCTTATATATCTGCACTGGATGTGGTTGAAGAGAAGCACAGTTTAACTGCGCATGAATTATTTGATGAAGATGATCTTGCTACTTTCTTAGCCAATTTGCATCAAGATATTAGAAACTTAAAGGCAATGCTTCATGCTATAGATATAGCTGGTCATGCTACAGAATCTTTTACTGACTTAGTTGTGGGACATGGGGAGTTATGGTCTGCGCAGATATTGTCTTATGCTGTTAAGAAGAAAGGGACTGAATGCAAATGGATGGACACAAGGGAAGTCCTCATTGTGAATTCTACTAGTGCTGATCATGTTGATCCTGATTACTTGGAATCTGAACGAAGACTTAATAAATGGTACTCTCTTAACCCATCTAAGGTTACCATTTGGACAGATGTGGATGGTGTGTACAGTGCAGATCCTAGAAAAGTTAGTGATGCCGTGATTTTGAAGACACTGTCTTATCGAGAGGCGTCGGAGATGTCTTATTTCGGCGCAAATGTCTTACATCCACGAACAATTAGTCCAGTTATTCGATACGGCATACCAGTTATAATAAGGAATATTTTCAATACCTCTGCTCCTGGAACAAAGGTCTGCCATCCTTCTCTTATTGAAAATGAAGATAAGAAGATATTAAAGAATTATGTCAAAGGCTTTACAACAATAGACAACTTGGCACTTGTAAATGTGGAAGGAACCGGAATGGCTGGTGTTCCAGGTACTGCCAGTACTATTTTTAGAGCAGTGAAAGAGGTTGGAGCCAATGTTATTATGATATCTCAGGCTAGTAGCGAGCAATCTGTATGTTTTGCTGTGCCCGAGAAGGAAGTAAAAGCTGTTTCTGAGGCATTGCAATCGATGTTCCAGAACGCATTGTATGCTGGGCGTCTTTCTCAGGTCGCAGTCATTCCAAATTGCAGTATTTTGGCAGCTGTTGGCCAGAAAATGGCAAGCACCCCAGGAGTTAGTGCCACTCTTTTCAATGCATTGGCTAAGGCCAACATAAATATCCTTGCTATAGCACAAGGTTGTTCCGAGTACAATGTTAGTGTTGTTCTTAAGCGGAAGGATTCTATAAAAGCTCTGCGGGCTGTCCATTCTAGATTTTATAACTCAGAAACCACCATAGCAATGGGCATAATTGGACCTGGATTAGTTGGGAGCACTCTCCTTGATCAGCTAAGGGATCAGGCAGAAACTTTGAAAGAAGAATCAAACATTGATTTACGTGTAATGGGGATCATGGGTTCCAAGTCGATGCTCCTTGATGATTCGGGAATCGACTTAGTAAAGTGGAGCGAAATTCGTGAGGAAAAAGTGGACTGCACAGCTGATTCCGGTGTAGCAAGCCATTACAATGACTGGCTGCGCAAAGGGATACATGTAGTCACCCCCAATAAAAAGGCAAATTCAGGACCACTTGATGAGTATTTGAGGTTAAGAGTTCTTCAGAGGCAATCATACACACATTACTTCTATGAAGCTACTGTTGGAGCTGGTCTTCCAATTATTAGCACATTACGCGGACTTCTCGAAACTGGTGACAAAATATTGCAAATAGAAGGCATCTTCAGCGGGACTTTGAGTTACATCCTTAATAATTTCAAAGATGGACGAGTTTTTAGTGACGTAGTTGCTGAAGCAAAGGAAGCAGGTTATACTGAACCAGATCCAAGGGATGATCTGTCTGGAACTGATGTTGCAAGAAAGGTGATAATTCTTGCAAGGGAATCTGGCTTGAAGCTAGAGCTTTCTGATATTCCTGTTGAAAATCTTGTGCCGGAACAATTAAGAGCTAGTGCATCAGCTCAAGAGTTTATGCAGAAATTACCAAAATTCGATCACGAGATATCAAAGAAACAAGAAGATGCTGACACTGCAGGGGAAGTGTTGAGATATGTGGGAGTGGTAGACGTGGCTAATCAAAAGGGGTCGGTGGAGCTTCGACGATACAAGAAGGATCATCCATTTGCTCAATTATCTGGCTCGGATAACATTATTGCATTCACAACAAGAAGGTATAGAGATCAGCCTCTGATAGTTCGTGGACCAGGAGCTGGTGCACAAGTCACAGCTGGAGGAATATTCAGTGACATTTTACGTCTTGCCTCATATCTTGGGGCTCCATCCTAG 2535 0.4209 MASFCPVTPQSLFSTSHFPHRTFQPHSLLPLHSSHLFRKSVSSLWGTDSPTFKIHSSLTDFTVDVAVEEKKLPKGETWSVHKFGGTCVGSSARINNVADVIINDDSERKLVVVSAMSKVTDMMYDLIYKAQSQDKSYISALDVVEEKHSLTAHELFDEDDLATFLANLHQDIRNLKAMLHAIDIAGHATESFTDLVVGHGELWSAQILSYAVKKKGTECKWMDTREVLIVNSTSADHVDPDYLESERRLNKWYSLNPSKVTIWTDVDGVYSADPRKVSDAVILKTLSYREASEMSYFGANVLHPRTISPVIRYGIPVIIRNIFNTSAPGTKVCHPSLIENEDKKILKNYVKGFTTIDNLALVNVEGTGMAGVPGTASTIFRAVKEVGANVIMISQASSEQSVCFAVPEKEVKAVSEALQSMFQNALYAGRLSQVAVIPNCSILAAVGQKMASTPGVSATLFNALAKANINILAIAQGCSEYNVSVVLKRKDSIKALRAVHSRFYNSETTIAMGIIGPGLVGSTLLDQLRDQAETLKEESNIDLRVMGIMGSKSMLLDDSGIDLVKWSEIREEKVDCTADSGVASHYNDWLRKGIHVVTPNKKANSGPLDEYLRLRVLQRQSYTHYFYEATVGAGLPIISTLRGLLETGDKILQIEGIFSGTLSYILNNFKDGRVFSDVVAEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDIPVENLVPEQLRASASAQEFMQKLPKFDHEISKKQEDADTAGEVLRYVGVVDVANQKGSVELRRYKKDHPFAQLSGSDNIIAFTTRRYRDQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02394 844 Pfam ACT domain 368 420 IPR002912 -
Vifa2g02394 844 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 647 818 - -
Vifa2g02394 844 Pfam Homoserine dehydrogenase 636 834 IPR001342 GO:0006520
Vifa2g02394 844 ProSitePatterns Aspartokinase signature. 80 88 IPR018042 GO:0004072|GO:0008652
Vifa2g02394 844 ProSiteProfiles ACT domain profile. 364 433 IPR002912 -
Vifa2g02394 844 PANTHER - 63 260 IPR011147 GO:0004072|GO:0004412|GO:0009067
Vifa2g02394 844 Pfam Amino acid kinase family 255 321 IPR001048 -
Vifa2g02394 844 Pfam Amino acid kinase family 79 234 IPR001048 -
Vifa2g02394 844 CDD ACT_AKi-HSDH-ThrA-like_1 359 438 - -
Vifa2g02394 844 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 636 821 - -
Vifa2g02394 844 FunFam Bifunctional aspartokinase/homoserine dehydrogenase 347 506 - -
Vifa2g02394 844 CDD ACT_AKi-HSDH-ThrA_2 440 505 - -
Vifa2g02394 844 ProSiteProfiles ACT domain profile. 445 522 IPR002912 -
Vifa2g02394 844 PIRSF ThrA 78 259 IPR011147 GO:0004072|GO:0004412|GO:0009067
Vifa2g02394 844 PIRSF ThrA 254 573 IPR011147 GO:0004072|GO:0004412|GO:0009067
Vifa2g02394 844 PIRSF ThrA 568 841 IPR011147 GO:0004072|GO:0004412|GO:0009067
Vifa2g02394 844 NCBIfam aspartate kinase 255 504 IPR001341 GO:0004072|GO:0008652
Vifa2g02394 844 Gene3D - 508 649 - -
Vifa2g02394 844 Gene3D Dihydrodipicolinate Reductase; domain 2 650 817 - -
Vifa2g02394 844 ProSitePatterns Homoserine dehydrogenase signature. 682 704 IPR019811 GO:0006520
Vifa2g02394 844 Gene3D - 78 256 IPR036393 -
Vifa2g02394 844 Pfam Homoserine dehydrogenase, NAD binding domain 516 628 IPR005106 GO:0016491|GO:0050661
Vifa2g02394 844 Gene3D - 257 334 IPR036393 -
Vifa2g02394 844 SUPERFAMILY Carbamate kinase-like 78 334 IPR036393 -
Vifa2g02394 844 Pfam ACT domain 438 501 IPR027795 -
Vifa2g02394 844 SUPERFAMILY ACT-like 348 423 IPR045865 -
Vifa2g02394 844 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 508 658 IPR036291 -
Vifa2g02394 844 SUPERFAMILY ACT-like 431 519 IPR045865 -
Vifa2g02394 844 Gene3D - 346 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02394 Vifa-Chr2 619423800 619435568 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02394 K12524 - gmx:100812202 1286.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02394 2 619423800 619435568 Vifa2g02394 2 619423800 619435568 ECH