Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02381 ATGGATTGTACAAGGAAAGGTGAAGCGAAACAGGAGGAGGAGGTTGGTTTCAGTCGACTCGCCTCCTTCGTATACGAATACGAACCGTTGTCTCAAGAAGATCTCGAATCAATTGAAGCTACTCTTCGATCTTCTCTTCCCACCACCACCACCACCTCTACCACCACCAATAACAACAATAAACGCCCCATCACCTCCCACTCTCCCACTCGCCGCAGCAGCCGACGCTTGCCTACATCGCTCATCGCTCTTCAACTCCCACGTTCCTCCTCTTTCTCGCCTTCCCCAGGCCATTCAAAGATGCGGTTGCCTGTAATGAAGTTTTGTGGGAAAATCATGTATAGCAGGACTTTTAATGATGTTGAGAAAGCTGTAACAAAGTTCCTAAAAGTTATTGAAGAAAAGAAAAGAGAGATGATGCAAATTGCAATCGGATTTGACATCGAGTGGAAACCCACCTTCAGAAAAGGTGTTCCGGCTGGGAAAGTAGCAGTGATGCAGATATGCTGTGACACTAGTCAGTGTCTTGTTCTTCACCTAATTCATTCTGGAATCCCTCAAAATCTTCAGCTTTTACTTCAAGATTCCACAGTTTTGAAGGTTGGAGCTGGGATTGGCGGTGATGCTACTAAGATTTCTAGAGATTATGACATATCCATTAAAGGTGTAGAAGATCTTTCTTTTCATGCTAATCAAAAGTTAGGTGGAGGTCTTCATAAGTGGGGTCTTGCATCGTTGACTGAAAAACTTTTATCAAAACAGCTTAAGAAGCCCAACAAAATAAGAATGGGAAATTGGGAGACTCCTATTTTATCAAAGGAACAACTAGAGTATGCTGCTACAGATGCTTTTGCTTCTTGGTTTCTGTATCAGACTATTAAAGATCTCCCGGATGTGCAGGATGCTACCGACAAGAGTAGTGAAGTTGATGTTGTGCCGCAACAATGA 948 0.4335 MDCTRKGEAKQEEEVGFSRLASFVYEYEPLSQEDLESIEATLRSSLPTTTTTSTTTNNNNKRPITSHSPTRRSSRRLPTSLIALQLPRSSSFSPSPGHSKMRLPVMKFCGKIMYSRTFNDVEKAVTKFLKVIEEKKREMMQIAIGFDIEWKPTFRKGVPAGKVAVMQICCDTSQCLVLHLIHSGIPQNLQLLLQDSTVLKVGAGIGGDATKISRDYDISIKGVEDLSFHANQKLGGGLHKWGLASLTEKLLSKQLKKPNKIRMGNWETPILSKEQLEYAATDAFASWFLYQTIKDLPDVQDATDKSSEVDVVPQQ 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02381 315 SMART 35exoneu6 129 298 IPR002562 GO:0003676|GO:0006139|GO:0008408
Vifa2g02381 315 MobiDBLite consensus disorder prediction 43 78 - -
Vifa2g02381 315 PANTHER 3-5 EXONUCLEASE 67 292 - -
Vifa2g02381 315 Gene3D - 97 301 IPR036397 GO:0003676
Vifa2g02381 315 FunFam Werner Syndrome-like exonuclease 96 300 - -
Vifa2g02381 315 SUPERFAMILY Ribonuclease H-like 144 293 IPR012337 -
Vifa2g02381 315 Pfam 3'-5' exonuclease 125 294 IPR002562 GO:0003676|GO:0006139|GO:0008408
Vifa2g02381 315 CDD WRN_exo 134 294 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02381 K22807 K10900 tpra:123905592 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02381 2 615322344 615325941 Vifa2g02381 2 615322344 615325941 ECH