Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02372 ATGGCTTCTCCACCAGACACAAGCAAAACCGTAAAGCTTGAACGTTACAATAGCTACCTCAGAAAAGTTAACAGCACAAAACTCCTTAACGCATCGTCCAAACTTCTCTTCCGAGCCACACTTTTAATAGCACTCGTCCTTGTGTTCTTCTTCACTTTCAATTACCCTCCACTCTCCGACTCCACCAACCACCACTTCCACACCCATTCCCACTTCCTCGCCTCCGCATTCGGCGGCGGCGGTGCATGGGAACGACAAATCCGTCACTCCGCCACACCCCGCCGTCCTAACGGTTTCATTGTACTTGTAACCGGTGCAGCCGGTTTCGTCGGTTCACACTCTTCCCTCGCTCTTAAAAAACGAGGCGACGGTGTTATAGGTCTAGATAACTTCAACACCTATTACGACCCGTCGTTGAAACGCGCGAGACAAGCTTTATTAACTCAGCATCAAATCTTCATCGTTGAAGGTGACCTAAACGACGCGCCGCTGTTAACAAAACTCTTCGACGTAGTTCCGATCACTCACATCCTTCATCTCGCAGCACAAGCCGGAGTTCGTTACGCCATGCAAAATCCACAATCCTACATCAAATCAAACATTGCCGGTTTCGTGAACCTTCTAGAAGTTTCAAAGGCTGCTAATCCTCAACCAGCAATAGTTTGGGCTTCATCGAGTTCAGTGTACGGTCTCAACACTGAGAATCCATTCTCAGAGCTTCATCGGACAGATCAACCGGCGAGTCTCTACGCCGCAACTAAAAAAGCCGGCGAGGAAATCGCTCATACTTATAACCACATCTACGGTCTCTCCCTCACCGGACTTCGCTTCTTCACGGTGTACGGTCCTTGGGGAAGACCAGACATGGCGTACTTCTTCTTCACAAAAGATATCCTCCATGGGAAAACCATCGATGTTTACCAAACACAAGAAGGAAAAGAAGTCGCGCGTGATTTTACCTACATCGATGATATCGTGAAAGGTTGCATAGGGGCTTTGGACACAGCGGAGAAGAGCACCGGGAGCGGCGGAAAGAAGAAAGCACCGGCGCAATTACGAATCTACAATCTCGGAAACACGTCGCCGGTACCGGTGGGGAAACTCGTATCGATTCTTGAAAACTTGCTCAGCACGAAGGCGAAGAAACACATCCTCAAGATGCCACGAAACGGCGACGTTCCGTATACGCACGCGAATGTGACATTGGCTTACAGAGATTTCGGGTACAAACCAACAACAGATCTATCAACGGGTTTGAGAAAATTCGTGAAGTGGTACGTTCGTTATTACGGGATTCAGTCAGGGCTAAAAAAGGAAAATCATCTCAGTAACGAAATACCCGAGGATTCCGCTTGA 1356 0.4853 MASPPDTSKTVKLERYNSYLRKVNSTKLLNASSKLLFRATLLIALVLVFFFTFNYPPLSDSTNHHFHTHSHFLASAFGGGGAWERQIRHSATPRRPNGFIVLVTGAAGFVGSHSSLALKKRGDGVIGLDNFNTYYDPSLKRARQALLTQHQIFIVEGDLNDAPLLTKLFDVVPITHILHLAAQAGVRYAMQNPQSYIKSNIAGFVNLLEVSKAANPQPAIVWASSSSVYGLNTENPFSELHRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILHGKTIDVYQTQEGKEVARDFTYIDDIVKGCIGALDTAEKSTGSGGKKKAPAQLRIYNLGNTSPVPVGKLVSILENLLSTKAKKHILKMPRNGDVPYTHANVTLAYRDFGYKPTTDLSTGLRKFVKWYVRYYGIQSGLKKENHLSNEIPEDSA 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02372 451 Pfam NAD dependent epimerase/dehydratase family 101 338 IPR001509 -
Vifa2g02372 451 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 94 432 IPR036291 -
Vifa2g02372 451 PANTHER EPIMERASE-RELATED 83 433 - -
Vifa2g02372 451 FunFam UDP-glucuronate 4-epimerase 3 100 431 - -
Vifa2g02372 451 Gene3D - 102 413 - -
Vifa2g02372 451 Gene3D - 278 426 - -
Vifa2g02372 451 PRINTS Nucleotide sugar epimerase signature 317 332 - -
Vifa2g02372 451 PRINTS Nucleotide sugar epimerase signature 392 409 - -
Vifa2g02372 451 PRINTS Nucleotide sugar epimerase signature 127 143 - -
Vifa2g02372 451 PRINTS Nucleotide sugar epimerase signature 352 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02372 Vifa-Chr2 612636466 612637821 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02372 1 451 Miscellaneous Gene Families AT3G23820 79.004 0.0 737
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02372 K08679 - zju:107422361 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02372 2 612636466 612637821 Vifa2g02372 2 612636466 612637821 ECH