Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02358 ATGGCAGAACCCACTGAGATCCGCAGTCAAATATCAGAGATTCACAAACTTTGCCGTGGCGACGGCGACGGCGCCGGTGAAGAATCAAACCCTTCGGATTCCCCCGATTTACTCCTCGACTGTGCTCTTTACGTTCAAAACACAGTGGAACAAATTGTATCCGAATTCTCTGATTTCGATTCCCTAGGAATTTCAGATTTAGATACTTATATAGAGCATTTGCAAAAGGAACTTAACAATGTAGAGGTTGAAACTGCCAATGTAGTTACCGAGATTGAGCATCTTGCAAAAACTAATCAGGATGATTCTGTTCAATTGGAGGCCAAACTTGAAGAATTGGAGCAGATGACAGCTGAGGCTAATGAAGGAAATGTTTCCCCGATGTTGCTAGACACCGACATGAATCTAGGAGAAAATTTGGAGCAATTGGAACTTGAAAATAAGGTTGATGAATTGAAGTCGATTCTGAAGGCTGTGGAGTGTCTTCAGTGTAAGGTTGAATGGTTTAATGCTCTAGAGCAGGTTGACGATGCATTGGCTGGTCTAAAAGTGATTGCATTTGACGTGAATTACATTAGGCTGTCTTTACAGACTTATGTCCCAACGGTAGAGAGCATTTCATGCCTACAGAGAGTTGAAGATACCATTGATGCATCTGTGCTGAGTCACGAGTTATTGATTGAAGTGTTTGAGGGGACCACAAAGTTAAAGGATATTCAGGTTTTTCCTAGGGATATATATGTGGATGACATTGTCGATAATGCAAAGTCTGTCAGGTCCGCTGTTTTCTTCTTTTCTCTGTCTAGTAAGTCCTCATTGCAGTGGTTAATACAAAAACTGCAAGATAGAATTATACTAGGCACTCTTAGGTGTCTCGTGGTAAAGGATGCTAATAAATCAAGATATTGTCTTGAGTACTTGGACAAAGATGAGACTATTGTAGCTCATTTGGTTAGAGGAGTTGATGCATACATAAAATTGTCTCATGGTTGGCCAATTTTTGGTTCTCCATTGAAGCTGATATCTATCAGGGGGTCAGATATTTTGAAGAAACGTTCTCCAAATTTTCACTGCGAAGTTGAGAATTTGGCCAAGAATCTAGATACTCATAATCAGCAAAATATACTGGACTTTGTTGATGCTGTTGAAAAAGTGATTATAGAACAGTTGCAGCTTGATCCTAGAGCCGCTGCTGGCTCTGGCTAA 1206 0.4055 MAEPTEIRSQISEIHKLCRGDGDGAGEESNPSDSPDLLLDCALYVQNTVEQIVSEFSDFDSLGISDLDTYIEHLQKELNNVEVETANVVTEIEHLAKTNQDDSVQLEAKLEELEQMTAEANEGNVSPMLLDTDMNLGENLEQLELENKVDELKSILKAVECLQCKVEWFNALEQVDDALAGLKVIAFDVNYIRLSLQTYVPTVESISCLQRVEDTIDASVLSHELLIEVFEGTTKLKDIQVFPRDIYVDDIVDNAKSVRSAVFFFSLSSKSSLQWLIQKLQDRIILGTLRCLVVKDANKSRYCLEYLDKDETIVAHLVRGVDAYIKLSHGWPIFGSPLKLISIRGSDILKKRSPNFHCEVENLAKNLDTHNQQNILDFVDAVEKVIIEQLQLDPRAAAGSG 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02358 401 Coils Coil 64 91 - -
Vifa2g02358 401 PANTHER RNA-DIRECTED DNA POLYMERASE (REVERSE TRANSCRIPTASE)-RELATED FAMILY PROTEIN 5 393 - -
Vifa2g02358 401 Coils Coil 142 162 - -
Vifa2g02358 401 Coils Coil 96 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02358 Vifa-Chr2 608231353 608235503 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02358 - - tpra:123908474 482.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02358 2 608231353 608235503 Vifa2g02358 2 608231353 608235503 ECH