Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02347 ATGGTTTCTAACAAAAGGGTTACTACATTCTTATTCATAATGTTGGCTGGTCTAGCTAGCTCAGATTTATCAAAAGACAGAGAAGAATGTGCTGACAAACTTGTTACTCTTGCTAGTTGTCTTCCATACGTTGGTGGTGATGCCAATACTCCCACTATAGATTGTTGCACCTCCCTCAAAATAGTCCTTGACAAAACCAAAAAATGCATCTGCATCCTCATCAAAGATCGTAATGACCCCAAACTCGGCTTCACTTTGAATGCCACTCTCGCTGTTCAGCTTCCAAGTGCTTGTCACATACCATCTAATATATCTCAATGTGTAGATCTTTTGCATTTGTCACCAAAATCTCCTGAAGCTCAGGTGTTTGAAGGACTTGGAAATTCTACCAAAACAAACAGTTCCCCACCAGGTTTTGTTGACAAGGGATCAAGTTCTGAGGAAAAGAGTGGTGGTGGTTTGGGAAAGAGGTGGGTGATGGCAGAGATGGTTTCTACTATTTTACCATTTGTTTTCATATCTCACTTGTTCATCCTAGCTTGA 543 0.407 MVSNKRVTTFLFIMLAGLASSDLSKDREECADKLVTLASCLPYVGGDANTPTIDCCTSLKIVLDKTKKCICILIKDRNDPKLGFTLNATLAVQLPSACHIPSNISQCVDLLHLSPKSPEAQVFEGLGNSTKTNSSPPGFVDKGSSSEEKSGGGLGKRWVMAEMVSTILPFVFISHLFILA 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02347 180 SMART aai_6 30 107 IPR016140 -
Vifa2g02347 180 Gene3D - 27 118 IPR036312 -
Vifa2g02347 180 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 13 144 IPR043325 -
Vifa2g02347 180 MobiDBLite consensus disorder prediction 124 151 - -
Vifa2g02347 180 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 29 108 IPR036312 -
Vifa2g02347 180 CDD AAI_LTSS 37 100 - -
Vifa2g02347 180 MobiDBLite consensus disorder prediction 124 141 - -
Vifa2g02347 180 FunFam Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 27 134 - -
Vifa2g02347 180 Pfam Probable lipid transfer 24 107 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02347 Vifa-Chr2 606149050 606149713 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02347 7 177 Acyl Lipid Metabolism Gene Families AT1G55260 44.571 6.48e-49 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02347 - - pvu:PHAVU_001G268300g 224.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02347 2 606149050 606149713 Vifa2g02347 2 606149050 606149713 ECH