Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02305 ATGGGTCGCGGAGCTGTGGTGGCTTTGATGCTATGCCTCCTAGGCGTCACCGTCTACGGTGAAGACCCTTATCTCTACTTCACGTGGAATGTTACCTATGGTACCATTTCACCTCTTGGAGTTCCCCAGCAGGGTATCCTCATCAACGGTCAATTTCCAGGACCTGAAATCAACAGCACAAGTAACAACAACGTTGTCGTTAATGTGTTCAACAACCTTGATGAACCACTGCTTTTCACATGGCACGGTATTCAACAGAGGAAGAATTCATGGCAAGACGGTACCCCTGGTACTTCTTGCCCTATCCTTCCCGGAACTAACTACACCTATAAGTTTCAAGTGAAGGATCAAATCGGAAGTTACTTTTACTACCCTACCACCGGTCTTCAAAGAGCCGTTGGTGGTTTCGGTGGTCTTAGAGTCTTCAGTCGTTTGTTGATCCCTGTTCCTTATCTTGACCCTGAAGATGAATACTGGGTTCTTATTGGCGATTGGTTCGGAAAGTCTCATAAATCTTTGAAGATGTTGTTGGACAGTGGTCGTTCTCTTGGAAGACCTACCGGAGTTATCATGAACGGTAAAAACGCTAAGGGTGACGGAACCGATGAGCCACTCTTCACAATGAAGCCGGGAAAAACCTATAAGTACAGAATCTGCAACACTGGTCTTAAGGACGCTCTTAACTTCAGATTCCAAGGACATTCAATGAAGTTGGTTGAAACTGAAGGCTCTCATCTCGTTCAAAACAACTATGACTCTCTCGACGTTCACGTTGGACAGTGTTACACCGTCCTCGTCACCGCCGATAAAGAGCCAATGGATTATTACATGGTTGCCTCCACTCGTTTCACCAAGTATACTTTAACCGCCAAGGGTATTGTTCGTTACACCAACGGTAAGGGTCCTGCTTCACCTGTTCTTCCACCTGCACCTGTTGGTTGGGCTTGGTCTCTTAACCAGTTCCGTTCCTTCCGTTGGAACTTAACTGCTTCTGCTGCTAGACCTAACCCTCAGGGTTCTTACCATTACGGTCAGATCAACATCACCCGCACCATTAAGCTTGTTAACTCTGTTAGCAAAGTCGATGGCAAACTCAGGTACGCTATCAACGGTGTCTCCCATGTTGATACCGAAACTCCTTTGAAGCTCGCCGAGTACTACGGTGTTGCCGATAAGGTGTTCAAGTACGACACTATCTCCGACATGCCACCGGCCATTCTCAACACCATCACTATTGCACCTAACGTCATCAACGCCACTTTCCGTACCTTCATCGAGGTCATCTTCGAGAACCATGGAAAGACCGTCCAGTCATACAACCTAGACGGTTACTCTTTCTTTGCTGTCGCAGTTGAGCCAGGAACATGGACACCAGAGAAAAGAAAGAACTACAACCTTCTTGATGCGATCAGCAGACACACAATTCAGGTGTTCCCTAAATCATGGGCTGCAATCATGTTGACATTCGACAATGCTGGTATGTGGAATTTGAGGTCAGAGCATGCTGAGAACCGTTACTTGGGACAACAACTCTACGTTAGTGTTCTGTCACCGGAATTCTCCAACAGGGATGAGTATAACCTTCCTGAGACTCAACAAGTTTGCGGTATCGTCAAGGATATGCCCAGGCCTGCACAAAAGTATAACTAG 1650 0.4673 MGRGAVVALMLCLLGVTVYGEDPYLYFTWNVTYGTISPLGVPQQGILINGQFPGPEINSTSNNNVVVNVFNNLDEPLLFTWHGIQQRKNSWQDGTPGTSCPILPGTNYTYKFQVKDQIGSYFYYPTTGLQRAVGGFGGLRVFSRLLIPVPYLDPEDEYWVLIGDWFGKSHKSLKMLLDSGRSLGRPTGVIMNGKNAKGDGTDEPLFTMKPGKTYKYRICNTGLKDALNFRFQGHSMKLVETEGSHLVQNNYDSLDVHVGQCYTVLVTADKEPMDYYMVASTRFTKYTLTAKGIVRYTNGKGPASPVLPPAPVGWAWSLNQFRSFRWNLTASAARPNPQGSYHYGQINITRTIKLVNSVSKVDGKLRYAINGVSHVDTETPLKLAEYYGVADKVFKYDTISDMPPAILNTITIAPNVINATFRTFIEVIFENHGKTVQSYNLDGYSFFAVAVEPGTWTPEKRKNYNLLDAISRHTIQVFPKSWAAIMLTFDNAGMWNLRSEHAENRYLGQQLYVSVLSPEFSNRDEYNLPETQQVCGIVKDMPRPAQKYN 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02305 549 Pfam Multicopper oxidase 30 142 IPR011707 GO:0005507
Vifa2g02305 549 Gene3D - 18 142 IPR008972 -
Vifa2g02305 549 SUPERFAMILY Cupredoxins 152 335 IPR008972 -
Vifa2g02305 549 Gene3D - 344 542 IPR008972 -
Vifa2g02305 549 SUPERFAMILY Cupredoxins 19 170 IPR008972 -
Vifa2g02305 549 PANTHER MULTI-COPPER OXIDASE 43 513 IPR045087 -
Vifa2g02305 549 Pfam Multicopper oxidase 157 298 IPR001117 -
Vifa2g02305 549 Gene3D - 154 334 IPR008972 -
Vifa2g02305 549 Pfam Multicopper oxidase 397 517 IPR011706 GO:0005507|GO:0016491
Vifa2g02305 549 SUPERFAMILY Cupredoxins 345 530 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02305 Vifa-Chr2 596603646 596605295 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02305 K00423 - gmx:100812197 924.465