Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02250 ATGGAGTTACCAACTCTGAGAAAACCCTTCATCTACTGGGTTTTATTTTCTTTCATTGTCTTTGCTCAGGTTAGCTATGGTTTTTACCTTCCTGGAAGCTACATGCATACTTATTCCAATGGAGAATTTATAAATGCCAAAGTCAATTCACTGACTTCAATTGAAACCGAGCTTCCCTTCTCATACTACAGCCTCCCATACTGCCAGCCCTCTGGCGGGATAAAGAAAAGTGCAGAGAATCTTGGAGAACTTCTTATGGGAGATCAGATTGATAACTCACCATACCGATTTCGAATGAATGTAAATGAGACGATATACCTCTGTACAACTTCGCCATTGAATGAACATGAAGTAAAGCTACTCAAGCAACGAACTCGTAATCTGTATCAAGTGAATATGATCCTTGACAACTTACCAGTTATGAGGTATACTAGCCAAAATGGGGTTAAAATCCAGTGGACCGGGTTCCCTGTTGGGTACACTCCAACTGATGGAAGTGCAGATTACATCATTAACCACCTGAAATTCACTGTATTGGTTCATGAATATGAAGGAAGAGGGGTTGAAATTATTGGGACTGGGGAGGAAGGTTTGGGCATTATTTCTGAAGCTGACAAGAAGAAGGCATCTGGGTATGAAATAGTTGGTTTTCATGTTGTTCCTTGTAGTATTAAGTATGACCCTGAAGCCATGACAAAGCACAAAACGTATGATAACATCAGTTCTGTAAGCTGCCCAAATGAGCTTGACAAGTATCAGACAATAAAAGAGCAAGAAAGGATATCATTCACATACGAGGTTGAATTTGTGAAAAGTGATATAAGATGGCCATCGCGTTGGGATGCTTATCTGAAGATGGAGGGTTCCCGAGTTCATTGGTTTTCGATCCTAAACTCCCTGATGGTTATTTTTTTCCTAGCCGGTATTGTTTTTGTCATTTTCTTAAGAACTGTCAGAAGGGATTTGACAAGGTATGAGGAATTGGACAAAGAGGCACAAGCTCAGATGAACGAGGAGCTTTCTGGGTGGAAACTTGTTGTGGGTGATGTATTTAGGGAGCCTGAATGCTCAAAGCTTCTCTGTGTGATGGTTGGGGACGGGGTTCAGATTCTTGGAATGGCTGCTGTCACTATTGTTTTTGCAGCACTTGGTTTCATGTCTCCAGCATCCCGAGGAATGCTTCTAACAGGAATGATCATTTTATATCTTATCCTGGGAATTGCTGCTGGTTATGTCAGTGTACGTCTTTGGAGGACCATTAAGGGAACACCAGAAGGATGGAGATCAATTTCCTGGTCTGCTGCATGTTTTTTTCCTGGCATTGCTTTCATTATCCTTACAGTACTCAATTTTATTCTATGGAACAGCAACAGTACTGGTGCTATACCCATTTCCTTGTATTTTGAGCTTTTCTTCCTCTGGTTCTGTATTTCAGTACCTCTGACCCTTATTGGCGGGTTTATGGGGACAAAAGGAGAGCCAATCGAATTTCCTGTACGGACCAATCAGATTCCAAGGGAGATTCCTGCACGGAAATATCCATCATGGCTTCTTGTTCTTGGTGCTGGAACTCTTCCGTTTGGAACCCTCTTCATTGAGCTTTTCTTTATCCTTTCCAGTATCTGGCTTGGGAGGTTCTATTACGTGTTTGGATTCCTGTTGGTCGTTCTTCTATTGCTGATTGTTGTTTGTGCTGAAGTATCGGTGGTCCTCACATATATGCATCTGTGTGTGGAAGATTGGCGGTGGTGGTGGAAGGCATTCTATGCTTCAGGTTCTGTTGCTCTCTATGTCTTCTTGTACTCCATTAACTACTTGGTTTTTGACCTGCAGAGCTTAAGTGGACCTGTCTCAGCTACTCTTTACCTAGGTTATTCACTACTCATGGCAATCGCAATCATGTTGTCTACTGGCACCATCGGTTTCCTTATGTCATTCTACTTTGTGCATTACTTGTTCTCATCAGTGAAGATCGATTGA 1980 0.4197 MELPTLRKPFIYWVLFSFIVFAQVSYGFYLPGSYMHTYSNGEFINAKVNSLTSIETELPFSYYSLPYCQPSGGIKKSAENLGELLMGDQIDNSPYRFRMNVNETIYLCTTSPLNEHEVKLLKQRTRNLYQVNMILDNLPVMRYTSQNGVKIQWTGFPVGYTPTDGSADYIINHLKFTVLVHEYEGRGVEIIGTGEEGLGIISEADKKKASGYEIVGFHVVPCSIKYDPEAMTKHKTYDNISSVSCPNELDKYQTIKEQERISFTYEVEFVKSDIRWPSRWDAYLKMEGSRVHWFSILNSLMVIFFLAGIVFVIFLRTVRRDLTRYEELDKEAQAQMNEELSGWKLVVGDVFREPECSKLLCVMVGDGVQILGMAAVTIVFAALGFMSPASRGMLLTGMIILYLILGIAAGYVSVRLWRTIKGTPEGWRSISWSAACFFPGIAFIILTVLNFILWNSNSTGAIPISLYFELFFLWFCISVPLTLIGGFMGTKGEPIEFPVRTNQIPREIPARKYPSWLLVLGAGTLPFGTLFIELFFILSSIWLGRFYYVFGFLLVVLLLLIVVCAEVSVVLTYMHLCVEDWRWWWKAFYASGSVALYVFLYSINYLVFDLQSLSGPVSATLYLGYSLLMAIAIMLSTGTIGFLMSFYFVHYLFSSVKID 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02250 659 Coils Coil 315 335 - -
Vifa2g02250 659 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 27 659 IPR004240 GO:0016020
Vifa2g02250 659 Pfam Endomembrane protein 70 59 612 IPR004240 GO:0016020
Vifa2g02250 659 SUPERFAMILY MFS general substrate transporter 293 487 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02250 Vifa-Chr2 583730151 583732130 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02250 11 659 Miscellaneous Gene Families AT4G12650 84.746 0.0 1105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02250 K17086 - gmx:100782426 1160.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g02250 2 583730151 583732130 Vifa2g02250 2 583730151 583732130 ECH