Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g02172 ATGGAGGAGAATGTAAAGAACACTAATTCTTCTCCTTCTCCACTCGAGCTAGAACATGTTAAACCAATAGCAGTTAATGGAGAAGAAGCTTCACCTAAAGAAGCTGGAGGATGGAGATCTGTTAAATATATCATCGGGAATGAGTCGTTTGAGAAATTGGCATCGATGAGTTTGATATCAAATCTAACGGTGTATCTTCTCACGAACTACAACCTAAGTGGATTATTCGTGGTTAATACGGTGCAAATTTGGAATGGATCCTCAAACATTGCATCCATAATCGGTGCTTTCATTTCTGATGCTTATCTTGGGAGGTTTCGAACCCTTCTATATGGCTGTATTGCGTCACTCATGGGTATATTGGTGATGACACTAACTGCTGGTATAAATGGATTGAGACCTGATGCATGCAAGGAGAGTGACAGACCTAATTGTGAGCATGCACAAGACTGGCAGCTAGGAGTTCTTTTTATAGGTCTTGGATTTTTGTCCATTGGTGCTGGTGGAATTAGGCCTTGCAACATTGCTTTTGGTGCCGACCAATTCGACAGCAAAACTGAAAAAGGAAGGGGACAATTAGAGAGTTTCTTTAATTGGTGGTACTTCACTTTCACCGTTGCACTTGTTATAGCACTCACCGGTGTTGTCTACATTCAAACCAATGTCAGTTGGGCTTTGGGGTTCGCGATTCCGACCGCCTGTCTCGCTTTCTCAATAACCATCTTTCTGTTAGGCCGGAAAACTTACATCTGCAAAGAGCCTCAAGGGAGTGTGTTTACTGACATGGTGAAGGTGATTTCAGCAGCGTGTCGAAAACGGAAGATTCGGATTGTGGATAGGACTTTGTATGATCCTGTTTCAAGAGTGTCCGATTCGGAGAGCGTTAGGCTTGTTCAAACGAATCGGTTTAAGTTTCTTGATAAGGCGGCCGTAATTGTTGATCCAAGTGAGTTGAACAATGAAGGATTTGCGAAGAATGATTGGAAGCTTTGTAGTTTGCAACAAGTGGAACACTTGAAATGCTTGTTGGGGATTCTACCAGTTTGGGTGACAGGAATTTGCTGTTTCATTGTAATGGATCAACAGAGCACGTTTGGTGTTCTTCAAGTTATACAAACTGATAGGTCTATTGGATCACACTTCAAAGTTCCACCAGGGTGGATGAACCTGACATCAATGATAGCACTTTCATTTTGGATATACATTTACGAATGTATCTACTTTCCTTTAATGAAGAGAATCAAGAAAAGGCATACCAAAAGAATGAGCATGGGAGTCAGAATCAGAATTGGGATCATCTTATCTATCCTATGCATGTTGGTAGCTGGAATTGTTGAGAAGGTACGTCGCGACTCGGCTTTGAAACACGCCTCGTTTGATTCGTCTATGAGCTTCGGTTTACTCCTTCCGCAGTTCGCGCTGTCAGGTTTAAACGAAGCCTTTGCTGCTGTCGCTATAATGGAATTCTTTACCTTGCAAATGCCGGAGTCGATGAGAACTGTCGCTGGCGCCGTCTTCTTTCTGAGTTTGTCCATTGCAAACTACATTGGTTCCTTAATTGTCAATATTGTTCATAAAGCAACATCACATGCCAAAACACCGTGGTTAGGCGGTCGCGATTTGAATCACAATAAGCTTGATTACTATTATTATTTGATTGCTTTTCTTGGAGTTTTGAATTTTATCTATTTCCATTTCTTTGCTTGCCGTTATCTGATAACAAGCAAGGACACTGAGAAAGGTGAGGTGGAACTAAATGCTGCTTTGAAGGGAGAATCACATGAACAAGATGATGAGGAGAAGGTTTTGGACATAGCAGCCAATAGATGA 1830 0.4175 MEENVKNTNSSPSPLELEHVKPIAVNGEEASPKEAGGWRSVKYIIGNESFEKLASMSLISNLTVYLLTNYNLSGLFVVNTVQIWNGSSNIASIIGAFISDAYLGRFRTLLYGCIASLMGILVMTLTAGINGLRPDACKESDRPNCEHAQDWQLGVLFIGLGFLSIGAGGIRPCNIAFGADQFDSKTEKGRGQLESFFNWWYFTFTVALVIALTGVVYIQTNVSWALGFAIPTACLAFSITIFLLGRKTYICKEPQGSVFTDMVKVISAACRKRKIRIVDRTLYDPVSRVSDSESVRLVQTNRFKFLDKAAVIVDPSELNNEGFAKNDWKLCSLQQVEHLKCLLGILPVWVTGICCFIVMDQQSTFGVLQVIQTDRSIGSHFKVPPGWMNLTSMIALSFWIYIYECIYFPLMKRIKKRHTKRMSMGVRIRIGIILSILCMLVAGIVEKVRRDSALKHASFDSSMSFGLLLPQFALSGLNEAFAAVAIMEFFTLQMPESMRTVAGAVFFLSLSIANYIGSLIVNIVHKATSHAKTPWLGGRDLNHNKLDYYYYLIAFLGVLNFIYFHFFACRYLITSKDTEKGEVELNAALKGESHEQDDEEKVLDIAANR 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g02172 609 CDD MFS_NPF1_2 42 571 - -
Vifa2g02172 609 Pfam POT family 106 535 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vifa2g02172 609 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 36 571 - -
Vifa2g02172 609 MobiDBLite consensus disorder prediction 590 609 - -
Vifa2g02172 609 Gene3D MFS general substrate transporter like domains 17 580 IPR036259 -
Vifa2g02172 609 SUPERFAMILY MFS general substrate transporter 55 568 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g02172 Vifa-Chr2 565224443 565226516 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g02172 28 576 Organic Solute Cotransporters AT5G28470 58.036 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g02172 K26552 - gmx:102670465 876.315